| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1030 |
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| Symbol | |
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| ID | 6974427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1161873 |
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| End bp | 1162415 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643390552 |
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| Product | putative conjugal transfer protein TraF |
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| Protein accession | YP_002275428 |
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| Protein GI | 209543199 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.201544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCT TCGGCTGGTT CTTCACCACC TATTTCGCAA TCCTCGGTGC CGGCACGTCA
ATGGTGATCC ATCCGGCTCC CCGGCTGATC TGGAACGCCA CTGCCAGCAC GCCGGTCGGG
CTGTATCGCC TGCAATCGGT AAGCCCCCTG CATGTCGGCG ATCTGATCGC GATCCGCCCG
CCCACCGACA TCGCCGGAAT GCTGGCGCGC GGTGGCTATC TGCCGCTCGG TGTGCCGTTG
CTCAAGCCGG TCGCGGCACT GGCGGGGCAA TTGGTCTGTC GCACTGGTGC TGCCGTCACG
GTCGACGGGA AGATGCTCGG CGATGCGCTG GCCCGCGATC ATCGCGGCCG TCCGCTGCCG
GTCTGGCAAG GCTGTCGGCA TGTCCTGCCC GGTCAGGTCT TCGTCATGAA TCCGGCAGTC
CCGACCAGTC TTGACGGCCG CTATTTCGGC ATCCTGCCGG TCGACACCGT GCTCGGTCGA
GCCCAGCCGC TGTGGCTCGT GCCGTCACCG ATTTCTCCCA ACTCCAAGCA GAAACGAGGC
TGA
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| Protein sequence | MMRFGWFFTT YFAILGAGTS MVIHPAPRLI WNATASTPVG LYRLQSVSPL HVGDLIAIRP
PTDIAGMLAR GGYLPLGVPL LKPVAALAGQ LVCRTGAAVT VDGKMLGDAL ARDHRGRPLP
VWQGCRHVLP GQVFVMNPAV PTSLDGRYFG ILPVDTVLGR AQPLWLVPSP ISPNSKQKRG
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