Gene Gdia_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1002 
Symbol 
ID6974399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1130296 
End bp1131174 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID643390524 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002275400 
Protein GI209543171 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCG CGAATCTTGA ATATTTCAAA CTGGCCGTGG AGGCCGGCAG CCTCACGCGG 
GCGGCCGGCC TCCACGGCGT GAGAGTGTCT ACATTTACCC GCGCCATCGA CAGGCTCGAA
GATGAGTTTG GCGTTACCTT GCTGGAGCGA AACCACGCCG GCGTTCGCCT CACGGTCGCC
GGTGACCTAC TGTTTCAGAG AATCGTCACG CTGCTTGATG ATCTCGATGA AGTCAAAGCT
TTATGCCAGA TGCTTGGAAC AGGCGGTCAC GGAGTCGTTC GTATCGGTAC ACTGCTCCCT
CCGGTCGGTG CGCTGTTCAG GCTTGCGTTG TCGGTCTGGA AGACGAAACA TCCCGACATC
AGAGTAATTT TTTACGAGAT GGGAACACGT GACCTTCGGA CCTCGCTGTT CCGCCGTCGT
GTGGATGTGA TCTTTTCCAC GCCATTTGCG AAATCCGGCG CGATTGAATC ACTTCCGTTT
TGCCGCGAGA GTCTGATGCT GGCCTTGTCG AGTGAACACC CGTTGCATCG ATACGAGAGT
ATCACACAAG GACAATTGCG AAATGAGACT TTTCTGGTTC AGGACTGGGG ACGCGATCAT
AGCGTGAGGG ACCGCTATAT CGAGATTCTC GGCGAAGATG TGACCATTGA AACCCATCCG
GCCGGAAAAC AGTCCGTGCT CGCACTGGTC AGCGCAGGAT ACGGGGTAAC GCTTGCTGTT
CAGAGCCAGG CCGAACGCGG CTTTCCAGGC GTCGTTTTTC GCCCGCTTCG AGAGCGTCAC
GCCCACCTGC ATATTCGTCT TGGCTGGGAG GCCGATCGCC AGGACGCGGT GACGGGCCGA
TTCGTTTCCT TTATTCGAGA TTTTGTTCGC CAGCACTAA
 
Protein sequence
MRSANLEYFK LAVEAGSLTR AAGLHGVRVS TFTRAIDRLE DEFGVTLLER NHAGVRLTVA 
GDLLFQRIVT LLDDLDEVKA LCQMLGTGGH GVVRIGTLLP PVGALFRLAL SVWKTKHPDI
RVIFYEMGTR DLRTSLFRRR VDVIFSTPFA KSGAIESLPF CRESLMLALS SEHPLHRYES
ITQGQLRNET FLVQDWGRDH SVRDRYIEIL GEDVTIETHP AGKQSVLALV SAGYGVTLAV
QSQAERGFPG VVFRPLRERH AHLHIRLGWE ADRQDAVTGR FVSFIRDFVR QH