| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0978 |
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| Symbol | |
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| ID | 6974375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 1101365 |
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| End bp | 1101994 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643390501 |
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| Product | putative conjugal transfer protein TraF |
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| Protein accession | YP_002275377 |
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| Protein GI | 209543148 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC GCGGCTGGTT TTTCACCACA TATTTCGCCG TACTCGGCGT GGGCGTTTCG
CTGGCGTTTC ATCCGGCCCC GCGCTGGGTC TGGAACGAGA CGGCCAGTGT GCCGGTCGGG
CTGTATCGCA TCCAGTCCAC CATGCCGGTC CGCGTCGGCG ACATCGTCGC CATCCGCCTG
CCCGAGCGCG AGGCGACGCT GCTGGCGATA CGCGGTTACC TGCCGTTCGG CGTGCCGCTG
CTCAAGCCTG TGGCAGCACT GGCGGGCCAG AGTGTCTGCC GCATCGGCAC CCACATCACC
ATTGACGGCA AACCTGTTGG TGACGCGAAG ACCGTCGATC ATCGGGGTTG CAAGCTGCCG
GTCTGGCAGG GCTGTCAGCG CCTCGGTCCG GGGCAGGTGT TTGTCATGAA CGCCGCCGTG
CCGACCAGTC TGGACGGGCG GTATTTCGGC GTCCTGTCGA TGGACACCGT CATCGGGCGT
GCCGTGCCGG TTCATGTCCG CATGGGCGAG GCGGAGCAAC CGCCCCCGCA TTTCGATCCC
CTCCCGGATC TGCGCGATCC GGTGCGGGAA CGGCCACTCC TTGGACCGCC CATGATGCTC
GTGAAACCGG GCGAACCGCC CATCGAATGA
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| Protein sequence | MTRRGWFFTT YFAVLGVGVS LAFHPAPRWV WNETASVPVG LYRIQSTMPV RVGDIVAIRL
PEREATLLAI RGYLPFGVPL LKPVAALAGQ SVCRIGTHIT IDGKPVGDAK TVDHRGCKLP
VWQGCQRLGP GQVFVMNAAV PTSLDGRYFG VLSMDTVIGR AVPVHVRMGE AEQPPPHFDP
LPDLRDPVRE RPLLGPPMML VKPGEPPIE
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