Gene Gdia_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0929 
Symbol 
ID6974326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1051546 
End bp1052493 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID643390454 
Productdihydrodipicolinate synthetase 
Protein accessionYP_002275330 
Protein GI209543101 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.626944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG CTTCCGCCAC CCCCTTCCGG GGCGTCTATG CCGCGACGCT GCTTCCCCTG 
CACGAAGACG GGATGATCGA CGCACCCGGC CTGGCCCGCC ACATGAAGGA CTGTACGTCC
TCCCCGGACA TCGTGGGTAT CCTCTGCAAT GGCCATGCCG GCGAGAACCA CCTGCTGAAC
CGCGAGGAGA AACGGCTGGT CGTCGAAACC GCCCGGCACG CGATCGGCAT GGAGAAGATC
ATCGTCTCGG GCGTGCTGTC GGAAGACATC CAGGACGCCT GCCTGCAGGC CCGCGACGCG
GTCGATGCCG GGGCGGATGC CCTTCTGGTC TTTCCCCCCT TCTCCTGGGC AGTATCGCAG
GATGCCGAGG CCATCGTCGC CCATCACCGT GCCATCTGCG AGGCAGTGGA TGCGCCGGTC
ATGCTATACC AGTCGTCGAT CGGCACCGGC GGCATGGCCT ATTCCCTTCC GATCCTGGAA
CGGCTGCTGC AGCTTCCCCG AATCGTGGCG ATCAAGGAGG GAAGCTGGGA GACCAACGCC
TATGACCGTC ATCGTCGGCT GGCGGCGCGC GTCGCCCCCC ACGTCGAGGT CATGGCCTCG
GGCGACGAGC ATCTGCTGCC CTGCTTCGCG ATTGGAACCA CCGGCAGCCT CGTCAGCCTC
GCGGCCATCC TGCCCCGCAG CATCGGCCGG CTGTGGAACG CCGTCCAGGC CCAGGACCTG
GACACCGCCC GCCGGGTCCA TGCCGCCATC CAGCCCCTGG CGAACCTGAT CTACGGCCGC
GCCCCGTCCG GCCGCGCCAC GCTGCGCCTG AAAGCCTGCC TGGTCATGCA GAAGACATGG
TCGTCCTGCC GGACCAGGAA GGCATCCGAA GTTCTTTCAC CGGAGGAATG GCGGGAATTG
TCACAGGCTC TAGAATACGC GCTGGTAATG GAACAGGAAC GTGACTGA
 
Protein sequence
MIPASATPFR GVYAATLLPL HEDGMIDAPG LARHMKDCTS SPDIVGILCN GHAGENHLLN 
REEKRLVVET ARHAIGMEKI IVSGVLSEDI QDACLQARDA VDAGADALLV FPPFSWAVSQ
DAEAIVAHHR AICEAVDAPV MLYQSSIGTG GMAYSLPILE RLLQLPRIVA IKEGSWETNA
YDRHRRLAAR VAPHVEVMAS GDEHLLPCFA IGTTGSLVSL AAILPRSIGR LWNAVQAQDL
DTARRVHAAI QPLANLIYGR APSGRATLRL KACLVMQKTW SSCRTRKASE VLSPEEWREL
SQALEYALVM EQERD