| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0763 |
|---|
| Symbol | |
|---|
| ID | 6974160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 867045 |
|---|
| End bp | 869210 |
|---|
| Gene Length | 2166 bp |
|---|
| Protein Length | 721 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643390292 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002275168 |
|---|
| Protein GI | 209542939 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.72696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTT TTCCCGCAGC CCCCTCGCCT GCCGAGGCGG CACTCTGCGG CTGCATCGTC
GCCTTCTGCG CCCATGCCGC CCCGGCCCGC GCCGGCGATC CGGTAGTTAC CCTGCCTTCG
CTCTCGATCG AGGCCACGGA TCTTCCATCG CTGGCGGACA GTCCGCTTTC CGCCTCCTCG
CCCGGCGCCA GCGACCGCGC GGCCGCGCAA CTCGGCAGCC CCGACGCCGT CGCCCTGTTC
CACGACACGC CCGGCTTCAG CGCCTATTCG GCCGGCGGGA TCTCGTCGCT TCCGGTGCTG
AACGGCATGG CGGACGACCG GGTGGCGACC GTCGTCGACG GAGTGCGGAT CAGCGCGGGG
TGCCCCAATC ACATGAACCC CGCCATGTCC TATATCGACC CGGACAGCGT GCAGACCGCG
ACCGCGATCG CCGGGATCAC GCCGGTCAGC CTGGGCGGCG ACAGTACCGC CGGCACGGTC
GATGTCGAGC GGCGCGACCC CCAATTCGCC CGGAAGGGCC AGGTCCTGGT CACCGGCCAT
GTCACCGGCA ATTACCGCAG CAATGGCGGC GGGTCCGGGG CGTCGGGCAC CGTCACGCTG
GCGGACGACA CGTTCAGCCT GCGCTACACG GCTTCCTACG CCCATGCCGG CGATTATCAC
GCGGGCGGCG ACGGGGGCGT GGTGCGCTCG ACCGATTACC TGACCTTCAA CCATGCCGTG
ACCCTGGGCA TGCACAAGGG CAACCATCTG CTGGCCCTGA CGGCAGGCCA GCAGGATACC
CCCTACGAGG GCTTTCCCAA CCAGTACATG GACATGACCA ACAACCGGTC GACCTACGTG
AACGGCAAGT ACGACGGCAG TTTCGACTGG GGCGACCTTG AGGTCCGGGG CTACTGGCAA
CGGGTCGATC ACGTCATGGA CATGCTGGGC GACAAGGGGG GCCATTCCCC CACCACCGGC
ATGCCCATGA ACACCGATTC CCGGATGGCG GGCTATACGC TCAAGGCGAC CATCCCGCTG
GGGCCGCGCG ACACGCTCCG GCTCGGCAGT TCGTTCGATC ATGACGGGCT GAACGACTGG
TGGCCGCCGT TGCAGGGCAG CATGATGATG GGACCGGGAA CGTTCCATAA CGTCAATAAC
GGCCACCGCG ACCGGCTGGG GCACTACGCG GAATGGGAAG CACGCTGGAC GCCCCGCCTG
TCCACCCTGC TCGGGTTCCG CAACGACCTC GTCATGATGA ATACCGGACC GGTCTCGCCC
TATTCCTGGA CCGGCATGAT GGCGGCGGCG GACGCCACGG CCGCCCGGGC GTTCAACGCG
ATGGACAGGG GCCGTACCGA CGTCAATTTC GACGTCACGG CCCTGACGCG CTGGCAGGCG
CTGGACAGCC TGACGATCGA AGGCGGCTAT GCCCGCAAGA CGCGCTCGCC CAACCTCTAT
GAACGCTATG CGTGGGGCCG GGGCGCCATG GCAACGAAGA TGATCGGCTG GTTCGGCGAC
GGCAACGGCT ATGTCGGCAA CCCGAACCTG ACGCCCGAAA TCGCCAATAC CGCCAGCATC
ACGATCGACT GGCACGACCC GCACGGACAG GCATGGGACC TGAAGATCCA GCCCTACTAC
ACCTACACGC ATCACTATGT GAACGTCGTG CGCCTGGCGC AGTACAGCAA CGGCACGTCG
CGGCTGGAAT TCGTCAACCA TGACGCCCAG AGCTACGGCA TCAATGCCTC CGGCTCGTAC
CGTCTGTGGA ACACGGTCCG GTATGGCCAG GGCGACCTGG TCGGCACCGT CGACTGGGTG
CGCGGGCAGG ATCTGGTGAC CCGTTCCGGC CTGTACCACC AGATGCCGGC CAACGGCATG
GTCGGTGTGC ACGAGACGGT CGGAAACTGG ACCGGCCGCG TCGAGATGAC GTTCGTGAAA
TCGAAGGACA CCGTCGACCG GCTGCGCAAC GAGCCGCGCA CGCCGGGCTA TGCGCTGCTG
GGCCTGGGGG GAAGCTATCG CTGGCGCTAC CTGGCGCTCA ACGCCGGCAT CGATAATGTC
ATGAACCAGA AATATTATCT GCCGCTTGGG GGATTGTCGC TGGGCGACTA CGACGCGACG
GGCGTTCTCG GCCCGCTGAA GGGCATGGGC CGGTCGTTCA ATGTCAGCCT GACCGGGTCG
TTCTGA
|
|---|
| Protein sequence | MSRFPAAPSP AEAALCGCIV AFCAHAAPAR AGDPVVTLPS LSIEATDLPS LADSPLSASS
PGASDRAAAQ LGSPDAVALF HDTPGFSAYS AGGISSLPVL NGMADDRVAT VVDGVRISAG
CPNHMNPAMS YIDPDSVQTA TAIAGITPVS LGGDSTAGTV DVERRDPQFA RKGQVLVTGH
VTGNYRSNGG GSGASGTVTL ADDTFSLRYT ASYAHAGDYH AGGDGGVVRS TDYLTFNHAV
TLGMHKGNHL LALTAGQQDT PYEGFPNQYM DMTNNRSTYV NGKYDGSFDW GDLEVRGYWQ
RVDHVMDMLG DKGGHSPTTG MPMNTDSRMA GYTLKATIPL GPRDTLRLGS SFDHDGLNDW
WPPLQGSMMM GPGTFHNVNN GHRDRLGHYA EWEARWTPRL STLLGFRNDL VMMNTGPVSP
YSWTGMMAAA DATAARAFNA MDRGRTDVNF DVTALTRWQA LDSLTIEGGY ARKTRSPNLY
ERYAWGRGAM ATKMIGWFGD GNGYVGNPNL TPEIANTASI TIDWHDPHGQ AWDLKIQPYY
TYTHHYVNVV RLAQYSNGTS RLEFVNHDAQ SYGINASGSY RLWNTVRYGQ GDLVGTVDWV
RGQDLVTRSG LYHQMPANGM VGVHETVGNW TGRVEMTFVK SKDTVDRLRN EPRTPGYALL
GLGGSYRWRY LALNAGIDNV MNQKYYLPLG GLSLGDYDAT GVLGPLKGMG RSFNVSLTGS
F
|
|---|
| |