Gene Gdia_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0679 
Symbol 
ID6974076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp768926 
End bp769549 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID643390208 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002275084 
Protein GI209542855 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000948495 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCTGC AATCCTGGCT GCTCTACCTG AACGCAGTGT TCCTGCTGTC GGCCATTCCC 
GGGCCGAACA TGACGCACAT CATGACCGTC AGCGTCCGAA ACGGCATCTG GCGGACCGTG
CCGGGCATGG TCGGATGCCT GCTGGCGCTG GTCGCGCTGA TGGGCGCATC GGCATTGGGA
CTCAGCGCCG TGCTGACGGC GTCGCCCACC CTGTTCAGGG TCCTGAAATT CGCCGGCGCG
TTCTATCTGG TCCAGATGGG CGTGCGGGCC TGGCTGGATC GCGGGTCGGC CCCGGCGGGG
CCGGACGCGG CCGTTCCCCT GGCGTGGCAT TCCACGCTGG GCACGTCCTT CCTGGTCGGG
GCCAGCAACC CCAAGGCCAT CATCTTCGCG GCATCGTTCC TGCCGCAATT CATCAACCCC
ACGGCGCCGC AGGCCCCGCA ATACGGGCTG CTGGTCGCGA CCTCGGCCGT GGTCGAGACG
CTGTGGTATC TGATCTATGC CAGCAGCGGC GCACGCCTGG CCGTCGTGCT GACCCGCGCC
GTGTGGCGGC GGCGCGTGCA GCGGTTCAGT GGCGCGCTGT TCATCCTGTT CGGCTTCGCG
CTGCTGCTGC ACGATCCGAA ATAG
 
Protein sequence
MTLQSWLLYL NAVFLLSAIP GPNMTHIMTV SVRNGIWRTV PGMVGCLLAL VALMGASALG 
LSAVLTASPT LFRVLKFAGA FYLVQMGVRA WLDRGSAPAG PDAAVPLAWH STLGTSFLVG
ASNPKAIIFA ASFLPQFINP TAPQAPQYGL LVATSAVVET LWYLIYASSG ARLAVVLTRA
VWRRRVQRFS GALFILFGFA LLLHDPK