Gene Gdia_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0672 
Symbol 
ID6974069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp761194 
End bp762345 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID643390202 
Productalanine racemase 
Protein accessionYP_002275078 
Protein GI209542849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.15843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.005206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGTTC CCCCCATTGC CGATACCGCA TGGCCCCATG CCCGGGCCGG CGCGACCCTG 
ACCATCGATC TTGATGCCAT CCGGGCCAAT TACCGCACGG TACGGAACCT GGCCGCCGGC
GCGGAATGCG CTGCGGTGGT CAAGGCCGAC GCCTATGGGC TGGGGGCGGC CCGGGTCGCT
CCGGCGCTGC AGGAGGAAGG AGCGCGGACA TTCTTCGTCG CGCATCTGGA CGAGGGCATG
GCGCTGCGAC GCCATGTCAG CGCCGATGCG CGCATCATCG TCCTGCATGG CGCCGTGCCG
GGGGCCGAGA AGGACTGTCT GCATGATGAC CTGATCCCGG TCCTGAACAG TGTCGACCAG
ATCCAGCGCT GGCGCGGGTT GGCCCATGAG GCGGGCCGCG CATTGCCGTC GATCCTGCAA
CTGGATACCG GGATGTCGCG CTTCGGGCTG TCCGAGAACG AGATCCGCGC GATCGTGGCG
GACCCGGACG GCCTGCGCGG GATCGACCTG CGCCTGGTCA TCAGCCACCT GGCCTGCGCG
GACGACCCGG ACGATCCAGC CAGTACCCGT CAGCGTGCGC GCCTGGTACG AATGCGCGCC
CTGCTGCCCC CCGCGCCGGT CAGCCTGGCC GCCTCGTCGG GTGTCTTCCT GGGGCGGGAC
TTTCATTTCG ATCTGGTCCG TCCCGGTGCG GCGCTGTACG GCGTGGCCCC CAACGCCGCT
ACCCCGAACC CGATGCGTCC GGTCGTACGC CTGCAGGCAC GAATCCTGCA AACGCGCCAT
GTCAGCCCGA ATGACGGGGT GGGTTACGGC CTGACCTACC GCCCCAGTGC GATGCGGCGA
ATCGCGACGA TCGCCACGGG CTATGCCGAC GGTTTCATGC GCAGCGGTGC CGCCCGGGGC
TGCGCCTGGC TGGGCGACAT GCAACTGCCG GTGCTGGGCC GGATTTCGAT GGATTCGATG
ACGGTCGACG TCACCGATGC CCCCGAAACG CTGACCCGGC CCGGCACCAT GGTAGACCTG
CTGGGGCCGC GCCGTGGCGT CGACGACGTG GCCCGGGCGG CCGGCACCAT CGGCTACGAA
ATCCTGACAT CGCTGGGGCA TCGCTATCAC CGCGCCTATG TCGCGGGCGG CTCCGACGCT
TTTTCCTCCT GA
 
Protein sequence
MPVPPIADTA WPHARAGATL TIDLDAIRAN YRTVRNLAAG AECAAVVKAD AYGLGAARVA 
PALQEEGART FFVAHLDEGM ALRRHVSADA RIIVLHGAVP GAEKDCLHDD LIPVLNSVDQ
IQRWRGLAHE AGRALPSILQ LDTGMSRFGL SENEIRAIVA DPDGLRGIDL RLVISHLACA
DDPDDPASTR QRARLVRMRA LLPPAPVSLA ASSGVFLGRD FHFDLVRPGA ALYGVAPNAA
TPNPMRPVVR LQARILQTRH VSPNDGVGYG LTYRPSAMRR IATIATGYAD GFMRSGAARG
CAWLGDMQLP VLGRISMDSM TVDVTDAPET LTRPGTMVDL LGPRRGVDDV ARAAGTIGYE
ILTSLGHRYH RAYVAGGSDA FSS