Gene Gdia_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0661 
Symbol 
ID6974058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp752164 
End bp752952 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID643390191 
ProductABC-2 type transporter 
Protein accessionYP_002275067 
Protein GI209542838 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.148353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0551935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC CATCGCTTCT TACGCTGTTC CGGGTGCAGA TGCGGGTGAT CGGCGCGCTT 
CTAATACGCG AATTGCATAC GCGGTTCGGG CGCGAGAATC TTGGTTATCT CTGGATAGTG
GGAGAGCCGA TCTTATTCTG CGCGGGTGTT GCTATCGCCT GGACGGCCAT ACGGCCCGCG
CATGAACATG GTCTGCAGAC GACTGCTATT GTCATAACGG GCTATGTCCC CCTGACAATG
TGGCGTCATT GCCTTGCTCA ATCCGTCCAC GCCTTCAACG CGAACGGCAG TCTTCTATTC
CACCGGCAGG TGACGCCCCT GGATTTAATT CTTACGCGGG TTATCCTTGA AGTTATGGGT
GCCTTAATCG CCGGTCTGAT CGTCACTGTC GGGGCAATTA TACTGGGGTT CATGAAGCCT
CCAGCAGATT ATGGACTGCT TTATCTGGGA ATTTTTTATC ACGTTTTATT TTGCCTCGGG
ACGGCACTTG TGGTTGCACC GCTGTCGGAG ATGTCAGAAC TTTTAGAAAA AACGATTTCA
GTCATATCCT ATCTGTCGTT GCCGGTATCC GGCGCGTTTA TGATGGTTGA TTGGATACCG
CAACATTACC GCTGGATTCT TCTGCTTTCG CCTAGCGTGA ACAGTATCGA AATGGTACGT
GGTGGGCAGT TTGGTTACTC CGCGCATGCG CATTATGACT TGGTCTATGA TAGTTGGGCT
ACGGTTACTA TGATTCTTTT GGGCTTGTCG CTGACACTTC GGGTTCGTCG TCATATATTA
GTTCAATGA
 
Protein sequence
MNTPSLLTLF RVQMRVIGAL LIRELHTRFG RENLGYLWIV GEPILFCAGV AIAWTAIRPA 
HEHGLQTTAI VITGYVPLTM WRHCLAQSVH AFNANGSLLF HRQVTPLDLI LTRVILEVMG
ALIAGLIVTV GAIILGFMKP PADYGLLYLG IFYHVLFCLG TALVVAPLSE MSELLEKTIS
VISYLSLPVS GAFMMVDWIP QHYRWILLLS PSVNSIEMVR GGQFGYSAHA HYDLVYDSWA
TVTMILLGLS LTLRVRRHIL VQ