| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0603 |
|---|
| Symbol | |
|---|
| ID | 6974000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 674986 |
|---|
| End bp | 677265 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643390134 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_002275010 |
|---|
| Protein GI | 209542781 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.615341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0181016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGA GCATCGGAGC GCAGGAAATG CGCGTCGGAC CGCCAGCAGC GGGGCTTTTG
AAGCAGCCTC CGACCGGCCG GCCGCGTGTC GCGGTCCTGC TGCCTCTGCC CTTCCCCGGC
CCGTTCGACT ATGCCGCACC GCCGGACCTG CCCGCCCCCC CGCTGCAACC CGGCGACATC
GTCACCGTGC CGCTGGGGCG GCGTACCGAA ACCGGCGTGG TCTGGGACCC GGAGCGCAAC
CTGCCGCCCG AATTCACCCC GCCCCCCATG AAGAGCGTGG CGGACGGACG GCTGAAGCCC
GTCATCGCGC GGCTGGACCA GCCGCCCTTG CCGGCCTCGC TGCGCCGCTT CGTCGACTGG
GTCGCGGCCT ATACGCTTTC CCCCCCGGGG CTGGTGCTGG CCATGGCGCT GCGCACCGGC
ACCGCCGCCC AGGCCGCCCC CGCGCTGGGC TGGGCCGTTG CCGATCCGCC GCCGGGCCTG
CGCGACACCC CGGCACGGCG AAGGGTGCTG GACATCGCCG CGCATGACGG GCCGCTGACC
GCCGCCGAAC TGGCCCGCCG TGCCGGGGTC GGCACCAGCG TGGTGCGCGG CCTGGCGGAT
GCCGGGGCGC TGCGCGGGGT AACGATGACG CCGCGCCCCG CCTTCGTGCG GCCCGATCCG
GACCATTGCC CCCCGGCACT GGACGGCGAG CAGGCGGAAT CGGCCCGGGC CCTGCGTGCC
CTGGCGGCGG AGGGCGGCTT TTCCGTCACC CTGCTGGAAG GAGTGACCGG ATCGGGCAAG
ACCGAGATCT ACATGGAGGC CATTGCCGCC TGCCTGGCGC GCGGGAAGCA GGTGATGGTG
CTGCTGCCGG AAATCGCCCT GTCCTCGCAA TGGACCGGGC GTTTCGCCCG CCGCTTCGGG
GCGGAGCCCG CGCTGTGGCA TTCCGACCTG GGGCCGCGCC TGCGCCGCGT CACCTGGCAC
GCGGTGGCCG ACGGCACGGC GCGGGTGGTG GTGGGCGCGC GCTCGGCCCT GTTCCTGCCC
TTCGCGGAAC TGGGGCTGAT CATCGTGGAC GAGGAACACG AGACCGCGTT CAAGCAGGAA
GACGGCGTGA CCTACCACGC GCGCGACATG GCCGTGGTGC GGGCGCGCAT GGACCGCGCG
CCGGTCGTCC TGGTCTCGGC CACGCCCAGC CTGGAGACCC TGGCCAATGT CGGGGCCGGC
CGCTACCGCC ATCTGGTGCT GACCGCGCGC CATGGCGGGG CGACGATGCC CGAGGTGCGC
ACCATCGACA TGCGCGCCCA TCCGCCCGAA CGGGGACTGT TCCTCTCGCC GGTGCTGACC
GAGGCCATCC GGCAGGCGAT CGGGCGCGGC GAGCAGGGGA TGCTGTTCCT CAACCGGCGG
GGCTATGCGC CGCTGACCCT GTGCCGTACC TGCGGCCACC GCCTGCAATG CCCGAACTGC
ACCGCCTGGC TGGTGGAACA TCGCGCGCGG CAGATCCTGA CCTGCCATCA TTGCGGCTAT
CAGGAAGCGA CACCGCCCGC CTGCCCCGAA TGCCACGCCG AATCCAGCCT GACGCCGATC
GGCCCCGGCG TGGAGCGCAT TACCGAGGAA GCGCGCGCCA CCTTCCCCGA TGCGCGCATC
CTGGTGATGG CCAGCGACAC CCTGCCCGGC CCCGCCGCCA CCGCCGACGC CGTGGCGCGG
ATCGCGCGGC GCGAGATCGA CCTGGTGATC GGCACGCAGA TCGTGGCCAA GGGCTGGCAT
TTTCCGCATC TGACGCTGGT CGGTGTCGTC GATGCCGACC TGGGCCTGGG CGGCGGCGAC
CTGCGCGCGG CGGAACGCAC GGTGCAGTTG CTGCATCAGG TCGCCGGCCG CGCCGGCCGT
GCCGAGGCCC CGGGGACGGT GCTGCTGCAG AGCTACACCC CCGACCATCC GGTGATGCTG
GCGCTGGTGT CAGGCGATTT CGAGAGTTTC ATGCGCCAGG AGGCCGAGCA GCGCCGCCCC
GGCTTCTGGC CCCCCTTCGG CCGGCTGGCC GCCCTGATCG TCAGCGCGGA TACGCCGGAG
GCCGCCGACG CCACCGCCCG GGCCCTGGGT CAGGCAGCGC CCCGGGGCGA CAGCCTGCAG
GTGCTGGGCC CGGCCCCCGC GCCGCTGGCC ATCCTGCGCG GCCGCCACCG CAGGCGACTG
CTGCTGCGCA CGCGGCGCGA GGTCGCGGTC CAGCCCCTGC TGCGGCAATG GCTGGACCGC
GTGACGCCCG AACGCGGGGC CCGGATCGAC ATCGATATCG ATCCGGTCTC GTTCCTTTAG
|
|---|
| Protein sequence | MAVSIGAQEM RVGPPAAGLL KQPPTGRPRV AVLLPLPFPG PFDYAAPPDL PAPPLQPGDI
VTVPLGRRTE TGVVWDPERN LPPEFTPPPM KSVADGRLKP VIARLDQPPL PASLRRFVDW
VAAYTLSPPG LVLAMALRTG TAAQAAPALG WAVADPPPGL RDTPARRRVL DIAAHDGPLT
AAELARRAGV GTSVVRGLAD AGALRGVTMT PRPAFVRPDP DHCPPALDGE QAESARALRA
LAAEGGFSVT LLEGVTGSGK TEIYMEAIAA CLARGKQVMV LLPEIALSSQ WTGRFARRFG
AEPALWHSDL GPRLRRVTWH AVADGTARVV VGARSALFLP FAELGLIIVD EEHETAFKQE
DGVTYHARDM AVVRARMDRA PVVLVSATPS LETLANVGAG RYRHLVLTAR HGGATMPEVR
TIDMRAHPPE RGLFLSPVLT EAIRQAIGRG EQGMLFLNRR GYAPLTLCRT CGHRLQCPNC
TAWLVEHRAR QILTCHHCGY QEATPPACPE CHAESSLTPI GPGVERITEE ARATFPDARI
LVMASDTLPG PAATADAVAR IARREIDLVI GTQIVAKGWH FPHLTLVGVV DADLGLGGGD
LRAAERTVQL LHQVAGRAGR AEAPGTVLLQ SYTPDHPVML ALVSGDFESF MRQEAEQRRP
GFWPPFGRLA ALIVSADTPE AADATARALG QAAPRGDSLQ VLGPAPAPLA ILRGRHRRRL
LLRTRREVAV QPLLRQWLDR VTPERGARID IDIDPVSFL
|
|---|
| |