Gene Gdia_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0564 
Symbol 
ID6973961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp630173 
End bp631264 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content46% 
IMG OID643390096 
ProductBaseplate J family protein 
Protein accessionYP_002274972 
Protein GI209542743 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.194278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000890546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCAAT ATCCAAATTA TTCAACAATA AATCAAAGAA TAAACTCTGC CATTGCTCAG 
GCATGTGGCA ATCAGCCTCT TCCTGGCTCT GTTCTGAACG CAGTCTCAAA GGCGATTGCG
AAAGAACTTT CATATCAATA TGGATATCTC GATTATATCT CCCTTCAGGG TGTTCCTTTC
ACTGCAACTG GTACGATTCT CGAAAACTGG GGGAGTTTAA AAGGAGTTGT TCGAGATTCA
GCCGTAGCTG CTTCTGGTTC TATAACCTTC AGTGGAACAG CCGATACGGA CATTCCTGCT
GGTTCGGTCA TTACGAGAAA TTCTGATGGC CTTACATTCA CCACGACCGC AAGTGGCGTA
GTCGGAAGTC CTGTTCCGAT AGTGGCATCT CAAACAGGTG TTATCGGAAA CACAGCTTCT
GGATCTGGAT TCACTCTATC GGTAGCAATC TCTGGAGTCA GCCCAAGCCT TACCCTTACC
AGCAATATTA CAAGTGGTAC GGACATTGAA ACTGATGACG CGCTCCGCTC CCGAATTCTA
GCCGCATTTT CTACTATTCC TTCAGGTGGA ACTCCGACAG ATCACGTCAA CTGGCTCCTT
GAGGTTCCAG GTGTTGAGCA GGCTTGGTGT GCTCCAGTCC CTGTTCAGGG AAATGTAGTC
GTCTGCTACA TCATGATGTC TCCTACCAAT GGGAATAACG GTTTTCCAAA TGGGACCGAT
GGCGTTTCGT CTTCAGATCC CCGTCTTCCT GCCGCAACAG GTGATCAGCT TATCGCTGCC
AATGCGACTT TCTCACTACG TCCCATCGGT GAGACTATGT ACATATCTGC CCCTGTTCCT
TACCCGATCA ACATAACTAT TAGTGGCATA TCAAATGCGA GTGCAGCACA AAAAAGTTCA
ATAAGCGCCG CTCTTTCAAA CTATCTTTAT TCCAGTGGCG ATCCATTAGG AACTTCAATT
TACACCACTT CCTTAGCTAA CGTGGTTGAA GCAGCTTATG GTTCATCGTC ATTTACGTTG
TTATCTCCTG CTGACACTGT TGCTATTGCT CAAGGGGGTT GGCCAACTCT TGGGACAATC
ACATATTCAT AA
 
Protein sequence
MFQYPNYSTI NQRINSAIAQ ACGNQPLPGS VLNAVSKAIA KELSYQYGYL DYISLQGVPF 
TATGTILENW GSLKGVVRDS AVAASGSITF SGTADTDIPA GSVITRNSDG LTFTTTASGV
VGSPVPIVAS QTGVIGNTAS GSGFTLSVAI SGVSPSLTLT SNITSGTDIE TDDALRSRIL
AAFSTIPSGG TPTDHVNWLL EVPGVEQAWC APVPVQGNVV VCYIMMSPTN GNNGFPNGTD
GVSSSDPRLP AATGDQLIAA NATFSLRPIG ETMYISAPVP YPINITISGI SNASAAQKSS
ISAALSNYLY SSGDPLGTSI YTTSLANVVE AAYGSSSFTL LSPADTVAIA QGGWPTLGTI
TYS