| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0543 |
|---|
| Symbol | |
|---|
| ID | 6973940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 600274 |
|---|
| End bp | 601515 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643390076 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002274952 |
|---|
| Protein GI | 209542723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000277419 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0534863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGC ATAGTTCTAG CAGCGTGGCG GGAGCGTTTA ATTCGCAGCC ATGGTCCATC
TACAAGCAGA CAAACTCAAA AAACTGGTTC GTCCGCTTCT CGATCAAGGG ACAGGGGCAG
ATTCGAAAGT CCCTTCAGAC CGCAGATGAG AAGGAAGCAG ATCGTAAGGC TGCACGGATC
TATTATGAGG CTCTCTTACG TGCAGAGCAG GGCTTGGAAG CCAGAGACAA GACTGTAAGG
GTCCTGGCAG ATGAGTGGAT CGCAGAGGGC GTCCTGAAGG CTCCTGAACG GACTGCTCTC
TCCCGATATA TCGTGGGATA CTTCGGGGAC GATAAGCCAT CAGACATCAC CTACAGGGGG
CTTCAGGCGT ATCGGAAATG GCGCTTAAGC TATTGGACAG AAGGGCCTGG TAAGAATCTG
GAGATGGTCG TCTATCAGCG ACTCGGGCGA CAGATTCGTA GGCCGGTGAC GAGAAAGACC
CCTACCCGCT CCACACTCAA CAGTGAGCAG GTCGTCTTTA AAAAATTCTT AACCCGATGT
CAGAATCTCG GGCACATAAA AACAATTCCC AAGTTTGATA AGATTGAAGG TGAAGTTCAC
AATCGGCCTG GGTTTTCTCA TGCCGAGATT GAAAAAATCT TGTCAGTCCT GAGAAAGAGG
ACCGTCCTCC CCGCTCTATC CAATGAGGAA CGTTATCCAC ATATTCTCCT CTATGGATAT
GTCGGAATTA TGTGTGGTTC GGGGATGCGC CCCATTGAGT GTCAAAAACT CAGATGGATC
GATCTAGTTG GTTTCGATGA ATCTCGAAAC GCTAAACTTT GTGAAGGTCG AATTACCGTC
CGGGTTCATG GCAAAGGTAA ATCAAGAGAG TTTGTACCTC TTGATGGGAC AATCTCTGAT
TTTCTAATGA TATGGGATGT TCAGAAAATA ATACGGGGAT CTGATCCAGA TCCCAATGAT
TATATCTTTG TTGACATCAA GGGTAGGCAT ATCCAGACCT TTAACCCAGA AGTAGTATCA
CTTCTGGAAG AATGCTCTCT GCGACAGGAT TACCGAGGAA TAAAGAGAAC ATCTTATTCG
TTCAGACACT ATTATATTAC GTTCATGATT AACGCACATG CGAACATATA CGATATCGCC
AAAAACTGCG GCACATCAGT AGCTATGATT GAAAAGTTCT ATTCACATGT CACGCTTGAA
TCGATACGAG ACAGACTGCG GCCTTCTGGA ACGCGGATCT AG
|
|---|
| Protein sequence | MGKHSSSSVA GAFNSQPWSI YKQTNSKNWF VRFSIKGQGQ IRKSLQTADE KEADRKAARI
YYEALLRAEQ GLEARDKTVR VLADEWIAEG VLKAPERTAL SRYIVGYFGD DKPSDITYRG
LQAYRKWRLS YWTEGPGKNL EMVVYQRLGR QIRRPVTRKT PTRSTLNSEQ VVFKKFLTRC
QNLGHIKTIP KFDKIEGEVH NRPGFSHAEI EKILSVLRKR TVLPALSNEE RYPHILLYGY
VGIMCGSGMR PIECQKLRWI DLVGFDESRN AKLCEGRITV RVHGKGKSRE FVPLDGTISD
FLMIWDVQKI IRGSDPDPND YIFVDIKGRH IQTFNPEVVS LLEECSLRQD YRGIKRTSYS
FRHYYITFMI NAHANIYDIA KNCGTSVAMI EKFYSHVTLE SIRDRLRPSG TRI
|
|---|
| |