Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0497 |
Symbol | |
ID | 6973893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 547403 |
End bp | 548824 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643390030 |
Product | recombination factor protein RarA |
Protein accession | YP_002274907 |
Protein GI | 209542678 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0213446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGGCA GGCGGGATGA CCACGGTGAC GGAGATCTGT TCGGCGGTCC GGCGTCCCCC GTGCAGGGCA CGTCGGGGCA GGGGGCGTCC GGTTCCGGCG GGCGCCGGGG GCGGGCCGCG CCGCCGCGCA CGCAGCCCCT GGCCGACCGG CTGCGCCCCG AATCGCTGGA CGATGTGGTG GGGCAGGACC ACCTGCTGGG CCCCGACGGC GCGCTGCGGC GCATGCTCGA TCGGGGATCG CTGGCCAGCC TGATCCTGTG GGGCGGCCCC GGGGTCGGCA AGACGACCAT CGCCCGCCTG CTGGCCGACG CGGCAGGGCT GCGTTTCGTG CAGCTTTCGG CGGTGTTTTC GGGCGTGGCC GACCTGAAGC GCGCGTTCGA CGATGCCCGG CGCCTGGGCG AAGCCGGGCA GGGGACGCTG CTGTTCGTGG ACGAAATCCA CCGCTTCAAC CGCGCCCAGC AGGATGGTTT CCTGCCGGTG GTCGAGGACG GGACGGTGGT CCTGGTGGGT GCCACCACCG AAAACCCATC CTTCGCGCTG AACGGCGCGC TGCTGTCGCG CTGCCAGGTG ATGGTGCTGC GCCGGCTGGA CGATCCGGCG CTGGAACGCC TGCTCTGCCG GGCGGAGGAG GCAACCGGTC GCGCGCTGCC CCTGACGCCG GACGGGCGCG CCACCCTGCG TGCCATGGCC GATGGTGACG GGCGCTACCT GCTGAACATG GTCGAACAGG TTCTGGCGGT TCGCACGGAC CAGCCGATGG ACGCGCACGG CCTGTCCGGC CTGCTGGCCC GGCGCGCGGT GCTGTACGAC AAGGACCGCG AGGAGCATTA CAACCTGATC TCGGCGCTGC ATAAATCCCT GCGTGGCTCC GATACCGATG CGGCCCTGTA CTGGTTCGCC CGCATGCTCG AAGGCGGCGA GGACCCGCGC TACATCGCCC GGCGGCTGAC CCGCTTCGCG GCCGAGGACG TGGGCATGGC CGATCCGCAG GCCCTGCCGC TGGCTATCGC GGCGTGGGAG ACGTACGAAC GTCTGGGCTC GCCCGAGGGG GAACTGGCCC TGGCGCAACT GGTGGTCCAT CTGGGCACCG CACCGAAGTC GAATGCCGTC TACACGGCGT ACAAGGCCGC GCGGCGCCTG GCGAAATCGA CCGGCAGCCT GATGCCGCCG GCCCATATCC TGAACGCGCC GACCAACCTG ATGAAGGATT TGGGATACGG TCGCGGCTAC GATTCCGAAT ACGCGGATGT CTACGCGGAT GCCGATCCGG GGGCGGGACA GCGGACCGCC GCGCGCGATC ACTTCCCCGA CGGGATGGGC CCGCAGCAGC TCTATCGGCC GTTCGATCGC GGGTTCGAGC GCGAAATCGG GAAACGTCTG GAATACTGGG CGCGGCTGCG CGCGGGCGGC AAGGGCCAAT AG
|
Protein sequence | MAGRRDDHGD GDLFGGPASP VQGTSGQGAS GSGGRRGRAA PPRTQPLADR LRPESLDDVV GQDHLLGPDG ALRRMLDRGS LASLILWGGP GVGKTTIARL LADAAGLRFV QLSAVFSGVA DLKRAFDDAR RLGEAGQGTL LFVDEIHRFN RAQQDGFLPV VEDGTVVLVG ATTENPSFAL NGALLSRCQV MVLRRLDDPA LERLLCRAEE ATGRALPLTP DGRATLRAMA DGDGRYLLNM VEQVLAVRTD QPMDAHGLSG LLARRAVLYD KDREEHYNLI SALHKSLRGS DTDAALYWFA RMLEGGEDPR YIARRLTRFA AEDVGMADPQ ALPLAIAAWE TYERLGSPEG ELALAQLVVH LGTAPKSNAV YTAYKAARRL AKSTGSLMPP AHILNAPTNL MKDLGYGRGY DSEYADVYAD ADPGAGQRTA ARDHFPDGMG PQQLYRPFDR GFEREIGKRL EYWARLRAGG KGQ
|
| |