| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0491 |
|---|
| Symbol | |
|---|
| ID | 6973887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 538612 |
|---|
| End bp | 541068 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643390025 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_002274902 |
|---|
| Protein GI | 209542673 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00487855 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGAC CGGGGGCACG TTCGGGGCGG GGCCGTGCCT GGCTGCTGGC ATCGGTGGCG
GCGGTCGTGC TCGTGGCAGG CAGCGCCACC ATGGCGGCGC GGGCCATGAT CGACCCCGCC
AGCCTGCGCC AGCAGGCGGT GGCGGCCGTC TGGCGCCAGA CCGGGCGCGT GCTGCGGGTG
GGTGCGCTGG ACGTGCGCAT CCTGCCCTAT CCCTCGGTGT CCGTTCGCGA CCTTGCGCTG
TCGGACATGG CGGGCGGGGC GCGACCGGAC ATGCTGACCG CCACCGGGCT GGATGCGCGG
CTGGCCATCC TGCCGCTGCT GCATCACGAA ATCCGGCTGG AGGACGTGCG CCTGACCCAC
CCCGACCTGC TGGTCGAACG GATGGCCGAC GGACGGGCGA ACTGGCAGAT GCATCCGCAG
CCCGACACGG CACCGGCCGC GTCCAACCCC GGCGGATCGT CGCATTCTGC CCGCTGGGCG
GTGCGCATCG GCAGCGTGCG GGTGCGCGAT GCCGTCGTGA CCTGGGATGA CCGGCAGGCC
CATGGCACGG GAACGGTCGC GCTGGATCGT GTGGCGCTGG ACGGGCTGAC GGGGTCGGCG
CCGTCCTTCG ACGTGCAGGG ACATCGCCCC GCGGATGCCG GTGCCGGCTT CACGATGCAG
GGCCAGGTCG GCCCCCTTGT TACGCCATCT TCCGACCCGT GGAAGGTGCG GGTCCAGGCG
GCGTTCCTGC TGGACGGCCA GCCGGGCGGC AGCCTGGGGC TGGACGGCGC GCTGTCCGAT
CCGGCGCATC TGCGCGGCTA TGACGTCACG CTGCATGCCA CGGCGGGCCA GGTTTCGGGG
CTGAACCGCC TGTTCGTGCA TGCCGGCCTG CCGGATGTGC GGAATGTCGA TCTCGCGGCC
CGGATCGTCG ACATGGCGGA TGGCGACGCC GCGCCGCAAC CCGGCCTGCG CATGCTGCAT
CTGCGGGCTG GTCCGGTCGA TGCCGGCCAG GTCGTGCCGG CCCTGCGGCT GGACCATCTG
GCGATCGACG CGCCGACCCC GGCCGATCAC ATGACGATCC AGGCGGCCGG GACGTACGGC
GCGCGACCGT TCGACCTGCA TGGCACGGTG GGCACCTTGT CCGAAACCAT CGCGGCAGCG
CGCAGCCGGC TGGGCAGTCC CATGCCGCTG GACCTGTCCG GGGACGTCGC GGGGGCGGCC
CTGCACGGGG GCGGCAGCAT CGGCGGCGGC CAGTCCGACC TGGATCTCCA TGTCGCCGCC
GATCGTCTGG CGCTGCCCGG CGACCGGGTT CTGGACCATC TGACCGCCGA TGCCCATGTC
GCGATGCAGG GCGGGGACAG CGTTCGCCTG TCGGGCCTGC GGGTGGATGC CACCCAGATG
GCGCTGGCCG GCGGGCTGGA TTTCACCCGC CATGGCGGAA CGGGCGGCGT TCCGCTGCTG
GGCGGCCGGA TACGGGCCGA CAGGCTGGAC CTGGACGCGC TGCACATCAC GGCCCCGCAC
GCCGCCGCCC CCACGCCCCG GGCCCCGGCG CCGGACACGA CCGCCCCTGC CGCGCCGGCA
CCAGCGCCGG CACCGGCCGA CGCCGTCCTG CCGTTCGACC GGCTGCGGCG GATGAATATC
GACCTCGATC TCGCGGCGTC GCAGCTTCGG CTGAACGGCG ACGATTATCA TGACGCGCTG
GCGCACGTGC TGCTGCGCGG CGGCCGGCTG GTGATCGACC CGCTGCGCGC GGACGGCGCG
GGCCGCCACC TGAACGGTAC GATCACGGTC GATGCGTCGG GCGACGTGCC GCGTCTTTCG
GCCAGCGTGG GATCGCTGGT CCTGCCGGCC GAATGGGTGG CGGCTCAGGC CGGTATCCCC
GCGTCGGTGC ATGGCGCGTT GCAGATGGTC GGCGTCCTGG ACACGCAGGG GACGACGCGC
GCGGCGCTAC GGTCCGCGCT GGCCGGCCAT CTGGGCCTGT CGCTGGTCAA CGGGCAGATC
GACGGTGCGG CCCTGGGCCG CCTGCTGGGT CCGGGTGCGG CCGGCGCGGC GCAGGACGCC
CTGGCCGGGC TGCGCTGCTT CGGGGTGCAT ATGGCGCTGG GCGGCGGCCA GGCCACGCTG
GATACGATCG GCATGCAGAC CCGCCGCCTG TCGGTCACCG GGCATGGAAC GGTCGGACTG
GTCCGGCAGG ACCTGGACCT GCATCTGGTT CCGCAACTGC TGATCGGCTC GACCGGGGCG
GCGATGCCGG TCGAGATCGG CGGCACGATC CAGGCGCCGC AGCCGCGCCT GGACCCGGCC
GGTGCCGGGC GGCGGTTCGT CCTGACCATC GGCCCGTCCT CCGGCATCGC CGATCCATGC
CCCGCCGCAT TGCAGGCGGC GCGCGAGGGC CAGCCTGGCC CGGCCCCCGG GGCCGCGCCC
AAGGCCAAGG CGCCAAAGGT CATGGACATG CTGCGCGGCC TGGGACTGTT CCGATGA
|
|---|
| Protein sequence | MTGPGARSGR GRAWLLASVA AVVLVAGSAT MAARAMIDPA SLRQQAVAAV WRQTGRVLRV
GALDVRILPY PSVSVRDLAL SDMAGGARPD MLTATGLDAR LAILPLLHHE IRLEDVRLTH
PDLLVERMAD GRANWQMHPQ PDTAPAASNP GGSSHSARWA VRIGSVRVRD AVVTWDDRQA
HGTGTVALDR VALDGLTGSA PSFDVQGHRP ADAGAGFTMQ GQVGPLVTPS SDPWKVRVQA
AFLLDGQPGG SLGLDGALSD PAHLRGYDVT LHATAGQVSG LNRLFVHAGL PDVRNVDLAA
RIVDMADGDA APQPGLRMLH LRAGPVDAGQ VVPALRLDHL AIDAPTPADH MTIQAAGTYG
ARPFDLHGTV GTLSETIAAA RSRLGSPMPL DLSGDVAGAA LHGGGSIGGG QSDLDLHVAA
DRLALPGDRV LDHLTADAHV AMQGGDSVRL SGLRVDATQM ALAGGLDFTR HGGTGGVPLL
GGRIRADRLD LDALHITAPH AAAPTPRAPA PDTTAPAAPA PAPAPADAVL PFDRLRRMNI
DLDLAASQLR LNGDDYHDAL AHVLLRGGRL VIDPLRADGA GRHLNGTITV DASGDVPRLS
ASVGSLVLPA EWVAAQAGIP ASVHGALQMV GVLDTQGTTR AALRSALAGH LGLSLVNGQI
DGAALGRLLG PGAAGAAQDA LAGLRCFGVH MALGGGQATL DTIGMQTRRL SVTGHGTVGL
VRQDLDLHLV PQLLIGSTGA AMPVEIGGTI QAPQPRLDPA GAGRRFVLTI GPSSGIADPC
PAALQAAREG QPGPAPGAAP KAKAPKVMDM LRGLGLFR
|
|---|
| |