Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0401 |
Symbol | |
ID | 6973795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 438934 |
End bp | 439848 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643389933 |
Product | integrase family protein |
Protein accession | YP_002274812 |
Protein GI | 209542583 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.966282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGC AGGCCGAGGC GTTCCTCGAA ATGCTGGCGG CCGAACGGGG TGCCGCCGCG AACACGCTGA AGGCCTATGG CCGGGACCTG GACGATTTCG CCGCCCACGC CCGGCAGGCG GGCCGGTCGC TCCATGACGC CGATTCCGCC CTGCTGCGCG ATTACATGGG CAGCCTGGCT CGTGCCGGAC TGTCGCCGCG GACCCAGGCG CGGCGCCTGT CCTGCCTGAA GCAGTTTCAC CTGTTCCTGG CGCGCGAGGG CGTGCGGCAG GACAATCCGG CCGAACTGCT GGACACGCCG CGCCTGCCCG CGACGCTGCC CCGCTTCCTG ACCGAGGACG AGGTCGATGC CCTGCTGGCC GCCTGCGTTC CCCCGCCCGA TGGCGGCGCG GCGCGGCGGT GGCTGGTGGC CCGCGCCGCG CTGGAAATGC TGTATGCGTC CGGCCTGCGG ATATCCGAAC TGCTGGCGCT GCCCCGGCGC GGCCTGGGCC GTGACGCGCA GATGCTGATG GTACGCGGCA AGGGCGGGCG CGAGCGACTC GTGCCCCTGT CGGCGGCGGC CCGGGCGGCG GCCGAGGCGC TGATCGCCCA TGACGGGCCC CGCCGCAGCC CATACCTGTT TCCCGGCCGC GCGCCGGACC GGCCGCTGAC GCGGCAGGGG TTCGACCGCA TCCTGCACGA CGTCGCGCTA CGCGCCGGGC TGGACCCGGC CCGGCTGTCC CCGCACGTAC TGCGTCATTC CTTCGCCACG CACATGCTGG CCCGGGGGGC CGACCTGCGG GCGCTGCAGG TCCTGCTGGG CCATGCCGAC ATCGCCACGA CCCAGATCTA TACCCACGTC CTGGCCGAAC GGCTGCGCCA GGCGGTCGAG GCCTATCACC CGCTGGCGCG TGGCGGGGAC GGAGAAACCC GCTGA
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Protein sequence | MSAQAEAFLE MLAAERGAAA NTLKAYGRDL DDFAAHARQA GRSLHDADSA LLRDYMGSLA RAGLSPRTQA RRLSCLKQFH LFLAREGVRQ DNPAELLDTP RLPATLPRFL TEDEVDALLA ACVPPPDGGA ARRWLVARAA LEMLYASGLR ISELLALPRR GLGRDAQMLM VRGKGGRERL VPLSAAARAA AEALIAHDGP RRSPYLFPGR APDRPLTRQG FDRILHDVAL RAGLDPARLS PHVLRHSFAT HMLARGADLR ALQVLLGHAD IATTQIYTHV LAERLRQAVE AYHPLARGGD GETR
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