Gene Gdia_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0373 
Symbol 
ID6973767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp412224 
End bp412973 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID643389905 
ProductRibonuclease III 
Protein accessionYP_002274784 
Protein GI209542555 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.136344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.561296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGT CTGAAAGCGG TGGCGCGGAC GGTGTGGTGG CGTCGGTCGA GGCGCGGGTC 
GGCTACCGGT TCCGCCGCCC CGACCTGCTG CGCGAGGCGC TGACCCATCG CTCGGCCGCC
CATCAGCGCA ATGGCGGGGG CGCGCGCCGG TCGCGTCAGC CGGCCGCGCG GCGCGGTGCG
GGGTCGAACG AACGGCTGGA ATTCATCGGC GACCGGGTGC TGGGGCTGGT GATGGCCGAA
TGGCTGCTGG AACGCTTCCC TGACGAACAG GAGGGGGCGC TGGGTCCGCG CCACGCCCAT
CTGGTGTCAC GTCCGGTCCT GGCCGCCATC GCCGGGACCA TGAATCTGCA GCAGGCGCTG
GACGTGGCGG AACACGAGGC CCGGGCGGGC GTGCGGCAGG TGGCCAACGT CCTGGCCGAC
GCGGTCGAGG CGATCCTGGG CGCCATCTAC CTGGATGGCG GGCTGGAGCC GGCCCGCCGC
TTCGTGCGTG CGGCGTGGAA CGAGGCGATC GTGGCCCAGG CGCAGCCTCC CAAGGACCCC
AAGACAGCCT TGCAGGAATG GGTCCTGGCG CGCGGCCTGC CGCTGCCGGC CTATCGGACG
GTGCAGATGG ACGGGCCCTC CCATGCGCCA CGCTTCGTCA TCGCGGTGAC GGCGGCGGGC
CAGTCGGCCG AGGGAATCGC CGGCAGCAAG CGCGCGGCCG AAAGTGCCGC CGCCGCCGAC
CTGCTGAGGC TGGTTGATGA GAGACAATAA
 
Protein sequence
MTASESGGAD GVVASVEARV GYRFRRPDLL REALTHRSAA HQRNGGGARR SRQPAARRGA 
GSNERLEFIG DRVLGLVMAE WLLERFPDEQ EGALGPRHAH LVSRPVLAAI AGTMNLQQAL
DVAEHEARAG VRQVANVLAD AVEAILGAIY LDGGLEPARR FVRAAWNEAI VAQAQPPKDP
KTALQEWVLA RGLPLPAYRT VQMDGPSHAP RFVIAVTAAG QSAEGIAGSK RAAESAAAAD
LLRLVDERQ