Gene Gdia_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0241 
Symbol 
ID6973633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp267262 
End bp268296 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID643389772 
Productmultidrug resistance protein MdtN 
Protein accessionYP_002274653 
Protein GI209542424 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA GGAAGCCTGT CGGTCTCATC ATCGCCGTGG CCTGCGTCGG GGCCGCTGTC 
CTGCTGGGCG TCCATGTCGC GAACGAGGAC AGCGCCCATC CTTCCTCCGA CAGCGGGTCG
ATCGACGCCG AAATCGTGCA CATGGCCTCG ACCGTCGGCG GCCGACTGGT CGATCTGCCC
GTTCACGTCA ATCAGGCGGT GCGCAAGGGC GACCTGCTCT ATCGTCTCGA TCCCGAACCG
TACGAGCTGA CCGTGCGGCA GGCGCAAGCC AATCTGGCGC TGGCACAGGC CGAGGTCGAA
AACCAGCGAC GGCTGGTCTC GGTCAAGACC GCCGACGCCG CCGTGGCACA GGCCCAGACC
GCGCGCGCGC GAACCAACCG CGATCTCGCC GCGCGCACGG TCGAACGCCT CTCGCCTCTG
GCCGGGCATG CCTATATCCC GTTGCAGCAA TATGATCAGG CCCGGGTTGC CCTTCGCGAT
GCCGAGATAT CGCTGGAGCA GGCGCATCGG CAGGAAGCGG CGGCGCAGAC CGCAATCGGC
GACCTGAACA GCACGCTGGC GGCGCGGGAC GCGGCTGCGG CGGCGCTCGA TCACGCGCGC
TATGAACTCA GGCAGACAAC GGTCGTCGCC CCTCTGGACG GCTACGTGAC CAGCCTGCGC
GTCAAGCCAG GCGAGATTCT GGCGCCGGCG CAAGTGCTCT TCACTCTGAT CGCCAACGAT
GCATGGTATG CCAATGCCAA TATCCGGGAG GTCGATCTGC GCCCCATCCG CCCCGGAGAC
TGCGCGACAG TCCATTCCAT GATCGACCGG CACGTGGCCA TTCGCGGTCA TGTGGACAGC
ATCGGCTGGG GCGTCCTGTC CGCCGATTCG GCAGGGAGCG CACGCGCCCT TCCCGTCGTG
CCGCGCGAAA TGGACTGGGT GCACGTGGCG CAGCGGTTCC CCGTGCGGGT CAAGATCGAT
CGGGCCGACC CGAACCTGCT GCGCCTGGGT GCCACCGCCA CCGTCGAGAT CCGGCATGGC
GCCGCCTGTC CCTGA
 
Protein sequence
MSGRKPVGLI IAVACVGAAV LLGVHVANED SAHPSSDSGS IDAEIVHMAS TVGGRLVDLP 
VHVNQAVRKG DLLYRLDPEP YELTVRQAQA NLALAQAEVE NQRRLVSVKT ADAAVAQAQT
ARARTNRDLA ARTVERLSPL AGHAYIPLQQ YDQARVALRD AEISLEQAHR QEAAAQTAIG
DLNSTLAARD AAAAALDHAR YELRQTTVVA PLDGYVTSLR VKPGEILAPA QVLFTLIAND
AWYANANIRE VDLRPIRPGD CATVHSMIDR HVAIRGHVDS IGWGVLSADS AGSARALPVV
PREMDWVHVA QRFPVRVKID RADPNLLRLG ATATVEIRHG AACP