Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0223 |
Symbol | |
ID | 6973615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 242199 |
End bp | 243125 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643389754 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002274635 |
Protein GI | 209542406 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0239924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCAT CGGGCCGGAC CGCGCATATG TTGCGGCTGC ATGCGCGCTG CATCGTGTAT TTCAACGCGG TGCGCGATTT CGGGTCGATC CGCGAGGCCG CGCGCCGCCT GAACGTCACC CCGTCCGCCC TGACGCGCCA GATCGCGCAG ATGGAGGACG AAATCGGGTC GCCGCTGTTC GACCGGCTGC CGGGCGGCAT GGTGCTGACG GCGGTGGGCG AAATCGTCGC CCGCCATATC ATCACCGTCA TGCAGGACGC CGTGCGCACG GACGAGCAGA TCGCGGCCCT GGCCGGCATG CGCGGCGGAC GCGTCAGCCT GATGGCGGTC GAAGGCGTCG CGGGCGACCT GATGGCCCGC CTGCTGACGC GCATGACCGA AACCTGTCCG GACGTCCAGT TGCAGGCGGA AACCGGCTCG CCCGCCGCCA TCATCGCGGC CCTGTCCGGG GGCACCACCG ACCTGGGCAT CGCCTTTTCG CTGGACCCGC CGGATGAACT GCGCCGGGTC GCGGTCGCGA ATTTCCCGGT CGGCGTCATC ATGCCCGCCA ATCATGCGCT GGCCGGCCAG CGCCGCGTGC GGATCGAGGA GTGCATCGGC CACAAGCTGA TCCTGCCCAC CCGGTCGCTG TCGCTCCACC GGGTCATGGA ACCCATGCTG CGACCCTGGC GCGACCGGCT GGACGTGGTG CTGGAAACCG GGTCCATCGA ACTGACCAAC CGCATGGTGG CGGCCGGGGC GGGGCTGGCG TTCCAGTCCC GGCTGGCGCT GGAATTCGAC ATCCAGCGCG GCGCCCTGGT CCATGTGCCG CTGGCCGATC CGCGTGCCGT GACCGACCTG GGCGTCTATG TCCGCGATGC CCGCTGGCTG CCGCCCGCGC TTGAACGGCT GATCGCCGAA ATACGGGCAA CGCTGCAGGC GATGTAA
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Protein sequence | MRASGRTAHM LRLHARCIVY FNAVRDFGSI REAARRLNVT PSALTRQIAQ MEDEIGSPLF DRLPGGMVLT AVGEIVARHI ITVMQDAVRT DEQIAALAGM RGGRVSLMAV EGVAGDLMAR LLTRMTETCP DVQLQAETGS PAAIIAALSG GTTDLGIAFS LDPPDELRRV AVANFPVGVI MPANHALAGQ RRVRIEECIG HKLILPTRSL SLHRVMEPML RPWRDRLDVV LETGSIELTN RMVAAGAGLA FQSRLALEFD IQRGALVHVP LADPRAVTDL GVYVRDARWL PPALERLIAE IRATLQAM
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