Gene ECH74115_5425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5425 
Symbol 
ID6968680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5072079 
End bp5073395 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content51% 
IMG OID643389077 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002273486 
Protein GI209396272 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.460942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.126626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA TCGTAAATGA AACCGTGAGT GTGAAGAAAA AGCCCAGCGG CAGGCGGGTG 
ATTTTTGCCT CGGCGTTTGG CAATGCGCTC GAATTTTTTG ATTTTGGCGT TTACAACTTT
TTTGTGGTCT ATATCAGCAC GCTATTTTTT CCGCCCAGTG CAGATAAAAA CGTCGCGCTA
CTGCTGGCGT TTGCCACTTT CGGCGTGAGC TTTTTTATGC GCCCGCTCGG CGGCATTATT
GTGGGGGCCT GGGCCGATCG TTTCGGACGC AAACCCGCGA TGGTGTTCAC CATTGCGCTG
ATGAGTCTTG GTACACTGAT GATCGGCATC GCACCGACGT ATGAAACGGC GGGCTATTGG
GGAACCGCGA CGCTGGTGCT AGCGCGTCTA ATTCAGGGCG TTGCGGCAGG AGGCGAAGTC
GGTGCCTCAA TGTCTTTGTT GGTTGAATCA GCTCCGGCAA ATCGTCGCGG TTTTTACAGC
AGTTGGTCAC TGGCGACTCA AGGCCTGGCA ACAACTTTTG GAGGTGTTGT CGCTTTAGGT
TTAAGTGCAT GGCTGCCCTT TGCGACCGGT TCAGAAACCG TCATGGCTGA ATGGGGCTGG
CGTGTGCCGT TTTTTATTGG CGTGTTATTA GCGCCTGTCG GCTGTTGGTT GCGTTTGAGT
CTGGAAAATG ATGTTCCTGA GCCAGCACAT AATAAGAAGG CCGCAGCCAG CGAAAGCGCC
TTCTCCTTAC TTATGCAACA TAAAGCGACT ATCGCTAACG GTATCTTGCT CGCTATTGGT
AGTACAGTCG CAACCTATAT CTCCCTCTTT TATTACGGTA CATGGGCGGC GAAGTATTTA
GGAATGAACC AAAACTATTC TCATGCAGCG ATGTTACTGG CGGGCGTTAT TACGTTTGTG
GGTGCGCTGC TGGTGGGGAT GTTGTGCGAT TCGGTCGGGC GTAAAAAGCT GATTTTAATC
TCCCGTGTGA TGGTGCTGAT CTGTAGCTGG CCGTCATTCT GGCTGTTGGT GAATTACCCA
AGCCCAGGCA TGTTGCTGAC GGTGGTTTTC GTGATGGTCA GCTTTACCAC GCTTGGCGGT
GTGCCAGTGA TGTTGTTGAT CTCTGAACTG TTGCCGAAAC GGATTCGGGC ATTGGGTTTT
GCGCTGGTTT ATAGCATTGG TGTGGCAATC TTTGGCGGTT TTGCTCAATA TTTCGCTACG
CAATCCATCG TGTTGCTGGA TAGTTTGACG GCTCCGGCGT GGTATCTGGG TGGAGGCACG
TTGCTGTCGA TGTTGGCGTT GTTGTACGTA AAAGAACCGG CCAAAGAATT GCAGTAA
 
Protein sequence
MTAIVNETVS VKKKPSGRRV IFASAFGNAL EFFDFGVYNF FVVYISTLFF PPSADKNVAL 
LLAFATFGVS FFMRPLGGII VGAWADRFGR KPAMVFTIAL MSLGTLMIGI APTYETAGYW
GTATLVLARL IQGVAAGGEV GASMSLLVES APANRRGFYS SWSLATQGLA TTFGGVVALG
LSAWLPFATG SETVMAEWGW RVPFFIGVLL APVGCWLRLS LENDVPEPAH NKKAAASESA
FSLLMQHKAT IANGILLAIG STVATYISLF YYGTWAAKYL GMNQNYSHAA MLLAGVITFV
GALLVGMLCD SVGRKKLILI SRVMVLICSW PSFWLLVNYP SPGMLLTVVF VMVSFTTLGG
VPVMLLISEL LPKRIRALGF ALVYSIGVAI FGGFAQYFAT QSIVLLDSLT APAWYLGGGT
LLSMLALLYV KEPAKELQ