| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5069 |
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| Symbol | |
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| ID | 6971911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4714480 |
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| End bp | 4716018 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643388747 |
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| Product | type III secretion outer membrane pore, YscC/HrcC family |
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| Protein accession | YP_002273173 |
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| Protein GI | 209395836 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.240332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAAGTTTTTT TATTTTTACA GCACTATTTT GCTGCAGTGC ACAAGCTGCC
CCGTCCTCTC TGGAAAAAAG ATTAGGCAAG AGCGAATATT TTATTATTAC TAAAAGTTCT
CCAGTACGTG CAATCCTTAA TGACTTTGCT GCTAACTACA GCATTCCTGT TTTCATCAGT
AGTTCCGTGA ATGATGATTT CTCTGGCGAA ATAAAAAATG AAAAACCTGT AAAAGTACTG
GAAAAACTGT CCAAACTATA TCATCTCACA TGGTATTATG ATGAGAACAT CTTGTATATT
TATAAAACAA ATGAAATATC AAGAAGTATA ATTACACCAA CATATCTGGA TATTGACTCA
CTGCTAAAAT ATCTGAGTGA TACAATCTCA GTAAACAAAA ACTCTTGCAA TGTGAGAAAA
ATTACGACAT TTAACTCGAT TGAAGTTCGG GGTGTTCCTG AATGTATAAA ATATATTACA
TCTTTATCAG AAAGTCTTGA TAAAGAGGCA CAGTCTAAAG CCAAAAATAA AGATGTTGTT
AAGGTCTTTA AACTGAACTA TGCGTCAGCG ACAGATATAA CATACAAATA CCGTGACCAA
AATGTTGTCG TCCCAGGTGT TGTCTCCATT CTGAAGACAA TGGCAAGTAA TGGTTCACTT
CCCAGTACCG GTAAAGGTGC CGTCGAGCGA AGCGGTAACC TGTTTGATAA CAGTGTAACG
ATTTCCGCTG ATCCACGTCT TAATGCAGTT GTTGTAAAAG ACCGCGAAAT AACGATGGAT
ATCTATCAGC AATTAATTTC TGAGCTTGAT ATTGAACAAA GGCAAATTGA AATTTCTGTC
TCAATTATTG ATGTTGATGC AAACGATCTT CAGCAGCTCG GCGTAAACTG GTCCGGTACG
TTAAATGCAG GACAAGGTAC GATTGCCTTT AATAGCTCTA CCGCACAGGC TAATATCAGC
TCTTCTGTGA TAAGTAATGC CAGTAATTTT ATGATTAGGG TGAATGCGTT ACAACAGAAC
TCGAAAGCTA AAATACTCTC TCAGCCTTCA ATTATAACCT TAAATAATAT GCAGGCGATT
CTTGATAAAA ACGTAACGTT TTATACAAAA GTCTCCGGAG AAAAGGTGGC GTCTCTGGAA
AGTATTACAA GCGGAACATT GCTGAGAGTG ACACCACGTA TACTTGATGA CAGCTCGAAT
AGCCTTACCG GAAAACGTCG GGAACGAGTT CGTTTGTTAC TTGATATTCA GGATGGCAAT
CAATCGACTA ACCAAAGCAA TGCTCAGGAT GCCAGCAGCA CCTTACCTGA AGTACAAAAT
TCAGAAATGA CAACAGAAGC GACATTAAGT GCAGGAGAAA GTTTATTACT TGGCGGATTT
ATCCAAGATA AAGAAAGTTC AAGTAAAGAT GGTATACCGC TGTTAAGCGA CATTCCTGTT
ATTGGTAGTT TATTCTCCAG TACGGTAAAA CAAAAACATA GTGTTGTTCG ACTCTTTTTA
ATTAAAGCAA CCCCGATAAA ATCTGCATCT AGCGAATAA
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| Protein sequence | MKKISFFIFT ALFCCSAQAA PSSLEKRLGK SEYFIITKSS PVRAILNDFA ANYSIPVFIS
SSVNDDFSGE IKNEKPVKVL EKLSKLYHLT WYYDENILYI YKTNEISRSI ITPTYLDIDS
LLKYLSDTIS VNKNSCNVRK ITTFNSIEVR GVPECIKYIT SLSESLDKEA QSKAKNKDVV
KVFKLNYASA TDITYKYRDQ NVVVPGVVSI LKTMASNGSL PSTGKGAVER SGNLFDNSVT
ISADPRLNAV VVKDREITMD IYQQLISELD IEQRQIEISV SIIDVDANDL QQLGVNWSGT
LNAGQGTIAF NSSTAQANIS SSVISNASNF MIRVNALQQN SKAKILSQPS IITLNNMQAI
LDKNVTFYTK VSGEKVASLE SITSGTLLRV TPRILDDSSN SLTGKRRERV RLLLDIQDGN
QSTNQSNAQD ASSTLPEVQN SEMTTEATLS AGESLLLGGF IQDKESSSKD GIPLLSDIPV
IGSLFSSTVK QKHSVVRLFL IKATPIKSAS SE
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