| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4675 |
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| Symbol | tsgA |
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| ID | 6970550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4315554 |
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| End bp | 4316735 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643388379 |
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| Product | hypothetical protein |
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| Protein accession | YP_002272807 |
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| Protein GI | 209396309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.398829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACA GCAATCGCAT CAAGCTCACA TGGATTAGCT TTCTCTCCTA CGCACTGACT
GGTGCGTTGG TTATTGTCAC CGGGATGGTG ATGGGAAATA TCGCCGATTA TTTCAATCTG
CCTGTTTCCA GTATGAGTAA CACCTTCACC TTCCTCAACG CCGGCATTTT AATCTCTATC
TTCCTCAACG CCTGGCTGAT GGAAATCGTC CCGTTGAAAA CGCAGTTACG TTTTGGCTTT
CTCCTGATGG TGCTGGCGGT TGCCGGTTTG ATGTTCAGCC ACAGCCTGGC GCTGTTCTCG
GCGGCGATGT TCATTCTCGG GGTGGTCAGC GGCATCACCA TGTCGATTGG TACATTCCTG
GTAACACAAA TGTATGAAGG GCGTCAGCGC GGTTCCCGCC TGTTATTTAC CGACTCCTTC
TTCAGTATGG CTGGGATGAT TTTCCCAATG ATCGCCGCGT TTCTACTGGC GCGCAGCATT
GAGTGGTACT GGGTTTATGC CTGCATCGGG CTGGTGTATG TCGCTATTTT TATTCTGACC
TTCGGCTGTG AGTTCCCGGC GCTGGGCAAA CATGCACCAA AAACGGATGC TCCGGTAGCG
AAAGAAAAGT GGGGGATCGG CGTACTGTTT CTCTCTGTTG CGGCGCTGTG CTACATCCTC
GGTCAGTTAG GTTTTATCTC CTGGGTGCCT GAGTATGCCA AAGGCCTGGG CATGAGCCTG
AATGATGCTG GCACGCTGGT GAGTAACTTC TGGATGTCAT ACATGGTCGG CATGTGGGCG
TTCAGCTTTA TTCTTCGCTT CTTTGATTTG CAACGCATTC TGACCGTACT GGCTGGTCTG
GCTGCGATTC TGATGTACGT CTTTAACACC GGAACACCGG CACATATGGC GTGGTCAATT
CTCGCCCTGG GCTTCTTCTC CAGCGCGATC TATACCACCA TCATCACCCT GGGTTCACAG
CAGACCAAAG TACCGTCGCC AAAACTGGTT AACTTTGTCC TGACCTGCGG AACCATCGGT
ACTATGTTGA CCTTTGTGGT TACCGGCCCG ATTGTTGAAC ATAGCGGTCC GCAGGCGGCA
CTGCTTACAG CAAACGGTCT GTACGCTGTC GTCTTTGTGA TGTGCTTCCT GTTAGGTTTC
GTCAGCCGTC ACCGTCAGCA TAACACCCTG ACCTCTCATT AA
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| Protein sequence | MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFNL PVSSMSNTFT FLNAGILISI
FLNAWLMEIV PLKTQLRFGF LLMVLAVAGL MFSHSLALFS AAMFILGVVS GITMSIGTFL
VTQMYEGRQR GSRLLFTDSF FSMAGMIFPM IAAFLLARSI EWYWVYACIG LVYVAIFILT
FGCEFPALGK HAPKTDAPVA KEKWGIGVLF LSVAALCYIL GQLGFISWVP EYAKGLGMSL
NDAGTLVSNF WMSYMVGMWA FSFILRFFDL QRILTVLAGL AAILMYVFNT GTPAHMAWSI
LALGFFSSAI YTTIITLGSQ QTKVPSPKLV NFVLTCGTIG TMLTFVVTGP IVEHSGPQAA
LLTANGLYAV VFVMCFLLGF VSRHRQHNTL TSH
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