Gene ECH74115_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3481 
Symbol 
ID6967475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3223391 
End bp3223954 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID643387287 
Productfimbrial protein 
Protein accessionYP_002271750 
Protein GI209398661 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TTGTAAAAAC AGCTATTGCT GCAACAATGG TAATGGGTGC GTTCGCTTCT 
ACTTCAACAA TCGCCGCTGG CAACAATGGT ACAGCACGTT TCTACGGCAC CATTGAAGAT
TCCCCGTGCT CTATCGTTCC TGATGATCAC AAACTGGAAG TTGATATGGG TGACATTGGT
TCAGGGATCC TGAAAAATAA CGGGACTTCT ACACCGAAAG CTTTCCAGAT CCATCTGCAA
GACTGTGTGT TTGACACCCA GACAACGATG ACCACTACCT TCACCGGTAA CGCGTCTTCT
ACCAACAGCG GCAATTACTA CACCATTTAC AATACCGATA CTGGTGCGGC ATTTAACAAT
GTCAGCCTGG CCATTGGTGA CGCTCAGGGA ACCTCTTATA AAAGCGGCGC GGGTATCGAA
CAGAAAATCG TAAACGATAC GGCGACCAAC AAAGGCAAAG CGAAGCAGAC GCTGGACTTT
AAAGCCTGGC TGGTGGGCGC TGCTGATGCG CCAGATTTAG GTAATTTTGA AGCCAACACG
ACCTTCCAGA TTACTTATCT CTAA
 
Protein sequence
MSKFVKTAIA ATMVMGAFAS TSTIAAGNNG TARFYGTIED SPCSIVPDDH KLEVDMGDIG 
SGILKNNGTS TPKAFQIHLQ DCVFDTQTTM TTTFTGNASS TNSGNYYTIY NTDTGAAFNN
VSLAIGDAQG TSYKSGAGIE QKIVNDTATN KGKAKQTLDF KAWLVGAADA PDLGNFEANT
TFQITYL