Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3481 |
Symbol | |
ID | 6967475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3223391 |
End bp | 3223954 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643387287 |
Product | fimbrial protein |
Protein accession | YP_002271750 |
Protein GI | 209398661 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGT TTGTAAAAAC AGCTATTGCT GCAACAATGG TAATGGGTGC GTTCGCTTCT ACTTCAACAA TCGCCGCTGG CAACAATGGT ACAGCACGTT TCTACGGCAC CATTGAAGAT TCCCCGTGCT CTATCGTTCC TGATGATCAC AAACTGGAAG TTGATATGGG TGACATTGGT TCAGGGATCC TGAAAAATAA CGGGACTTCT ACACCGAAAG CTTTCCAGAT CCATCTGCAA GACTGTGTGT TTGACACCCA GACAACGATG ACCACTACCT TCACCGGTAA CGCGTCTTCT ACCAACAGCG GCAATTACTA CACCATTTAC AATACCGATA CTGGTGCGGC ATTTAACAAT GTCAGCCTGG CCATTGGTGA CGCTCAGGGA ACCTCTTATA AAAGCGGCGC GGGTATCGAA CAGAAAATCG TAAACGATAC GGCGACCAAC AAAGGCAAAG CGAAGCAGAC GCTGGACTTT AAAGCCTGGC TGGTGGGCGC TGCTGATGCG CCAGATTTAG GTAATTTTGA AGCCAACACG ACCTTCCAGA TTACTTATCT CTAA
|
Protein sequence | MSKFVKTAIA ATMVMGAFAS TSTIAAGNNG TARFYGTIED SPCSIVPDDH KLEVDMGDIG SGILKNNGTS TPKAFQIHLQ DCVFDTQTTM TTTFTGNASS TNSGNYYTIY NTDTGAAFNN VSLAIGDAQG TSYKSGAGIE QKIVNDTATN KGKAKQTLDF KAWLVGAADA PDLGNFEANT TFQITYL
|
| |