Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3290 |
Symbol | cirA |
ID | 6971375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 3021133 |
End bp | 3023112 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643387102 |
Product | colicin I receptor |
Protein accession | YP_002271566 |
Protein GI | 209396460 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.359827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.810258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAGGT TGAACCCTTT CGTACGGGTC GGGCTGTGTT TGTCCGCTAT TTCTTGTGCA TGGCCTGTGT TAGCGGTCGA TGACGATGGC GAAACGATGG TTGTCACTGC ATCTTCCGTT GAACAAAACC TTAAAGATGC ACCCGCCAGT ATCAGCGTCA TTACCCAGGA AGACCTGCAG CGAAAACCGG TACAGAATCT GAAGGATGTC CTCAAAGAAG TGCCTGGCGT ACAACTGACG AACGAAGGGG ATAACCGTAA GGGCGTTAGT ATTCGTGGTC TGGACAGCAG CTACACCCTG ATTCTTGTCG ACGGTAAACG CGTTAACTCC CGCAATGCCG TCTTCCGCCA CAATGATTTC GATCTGAACT GGATCCCGGT CGATTCCATC GAACGTATTG AAGTGGTCCG TGGCCCGATG TCGTCGCTGT ACGGTTCCGA TGCGCTCGGC GGTGTAGTGA ATATCATCAC CAAAAAAATC GGTCAGAAAT GGTCGGGTAC CGTTACCGTC GATACCACCA TTCAGGAACA TCGCGATCGC GGTGATACCT ATAACGGTCA GTTCTTTACC AGTGGACCAT TAATTGATGG TGTGCTGGGA ATGAAAGCTT ACGGCAGCCT GGCAAAACGT GAAAAGGATG ACCCGCAAAA CTCAACGACC ACCGATACCG GAGAAACGCC GCGTATTGAA GGATTCTCCA GCCGCGACGG CAATGTCGAA TTTGCCTGGA CACCGAATCA AAATCACGAT TTTACTGCCG GATACGGTTT CGACCGTCAG GATCGTGATT CCGACTCGCT GGACAAAAAC CGCCTGGAAC GCCAGAACTA CTCCGTCAGC CATAATGGGC GTTGGGATTA CGGCACCAGC GAACTGAAAT ACTACGGTGA GAAAGTCGAG AACAAAAACC CTGGCAACAG CAGCCCGATA ACTTCCGAAA GCAATACGGT CGACGGCAAA TACACGTTGC CGCTGACGGC GATTAATCAG TTTCTCACGG TTGGCGGTGA ATGGCGTCAC GACAAACTTA GCGATGCGGT GAACCTGACC GGGGGAACCA GCTCCAAAAC GTCTGCCAGC CAGTACGCGC TGTTTGTGGA AGATGAATGG CGGATCTTCG AGCCGCTGGC GCTGACGACC GGCGTGCGTA TGGACGATCA CGAAACCTAC GGTGAACACT GGAGTCCGCG TGCCTACCTG GTTTATAACG CCACCGACAC CGTAACGGTG AAAGGGGGCT GGGCGACGGC ATTTAAAGCA CCTTCTCTGT TGCAACTTAG CCCTGACTGG ACGAGCAATT CCTGCCGTGG CGCATGTAAG ATTGTGGGTA GCCCGGATCT GAAACCAGAA ACCAGCGAAA GTTGGGAGCT GGGGCTTTAC TACATGGGTG AAGAAGGCTG GCTGGAAGGG GTTGAATCCA GCGTTACCGT TTTCCGTAAC GATGTGAAAG ATCGTATCAG CATCAGCCGT ACGTCTGACG TCAATGCTGC ACCGGGCTAC CAAAACTTTG TTGGTTTTAC AGCGAACGGT GTGCCGGTAT TTAGCTACTA CAACGTTAAC AAAGCACGTA TTCAGGGCGT GGAAACCGAG CTGAAAATTC CGTTCAACGA TGAATGGAAA CTGTCACTCA ACTACACCTA CAACGATGGT CGTGATGTCA GCAACGGCGA AAACAAACCG CTATCCGATC TGCCGTTCCA TACCGCTAAC GGTACGCTGG ACTGGAAACC GCTGGCGCTG GAAGACTGGT CATTCTATGT TTCTGGTCAC TATACCGGGC AGAAACGAGC CGACAGCGCG ACGGCTAAAA CACCGGGCGG TTATACCATC TGGAATACCG GCGCGGCCTG GCAGGTGACT AAAGACGTCA AACTGCGCGC AGGCGTGCTG AACCTTGGCG ACAAGGATCT CAGTCGTGAC GACTACAGCT ATAACGAAGA CGGACGTCGT TACTTTATGG CAGTGGATTA TCGCTTCTGA
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Protein sequence | MFRLNPFVRV GLCLSAISCA WPVLAVDDDG ETMVVTASSV EQNLKDAPAS ISVITQEDLQ RKPVQNLKDV LKEVPGVQLT NEGDNRKGVS IRGLDSSYTL ILVDGKRVNS RNAVFRHNDF DLNWIPVDSI ERIEVVRGPM SSLYGSDALG GVVNIITKKI GQKWSGTVTV DTTIQEHRDR GDTYNGQFFT SGPLIDGVLG MKAYGSLAKR EKDDPQNSTT TDTGETPRIE GFSSRDGNVE FAWTPNQNHD FTAGYGFDRQ DRDSDSLDKN RLERQNYSVS HNGRWDYGTS ELKYYGEKVE NKNPGNSSPI TSESNTVDGK YTLPLTAINQ FLTVGGEWRH DKLSDAVNLT GGTSSKTSAS QYALFVEDEW RIFEPLALTT GVRMDDHETY GEHWSPRAYL VYNATDTVTV KGGWATAFKA PSLLQLSPDW TSNSCRGACK IVGSPDLKPE TSESWELGLY YMGEEGWLEG VESSVTVFRN DVKDRISISR TSDVNAAPGY QNFVGFTANG VPVFSYYNVN KARIQGVETE LKIPFNDEWK LSLNYTYNDG RDVSNGENKP LSDLPFHTAN GTLDWKPLAL EDWSFYVSGH YTGQKRADSA TAKTPGGYTI WNTGAAWQVT KDVKLRAGVL NLGDKDLSRD DYSYNEDGRR YFMAVDYRF
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