Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3245 |
Symbol | |
ID | 6969129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2980875 |
End bp | 2981822 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643387061 |
Product | hypothetical protein |
Protein accession | YP_002271525 |
Protein GI | 209399474 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.569241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00000917948 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAGCGAAA TTAATTATCA GGCACTGCGT GAAAAGGCAG AGAAAGCAAC TAAAGGAAGC TACATCGTAG GGCATACATC TGTTAACCAG CACGGCAATT TAACAGGAGT TTTTGTTTGC CAAAAATGGA AAGGAGAACC CGGTGGTGTG ATTGCGGAAT GTCATGTTAA CTGCCTGGTT GAAACAGATG TTCAGGCTTA TGCAAACGCT GAATTTATTG CTGCCTTTAA TCCAAATGTT GCGCTGGCGC TTCTGGATGA ACGGGAAAGA AACCAGCAAT ACATCAAACG CCGCGACCAG GAGAACGAGG AGATTGCGCT TACGGTTGGG AAGCTGCGTG TTGAGCTTGA AGCAGCAAAA TCAAAACTCA ACGAGCAGCG TGAATATTAC GAGGGAGTAA TCGCGGATGG AAGTAAGCGC ATAGCAGAAC TGGAAAAACA ATGCGCCGAA TGGGAGCGAA AAGCATTAAG CAACTTTGAA GAGTGTGCTG CGATGGCTGA ACGTATCGAA GAGATGCAGA CAAAATCTGC ACCAGATTCG TTTGGCATCA TCGGTGAAAA TATTCGAACA CAGGACAATC GAATAACGTC AGATCCCATG TTTTGTGTGT ATCAAAAGCG CGAAATCGCT GTTGATGCTG ATTATGACCA TGACCGGATT GTCTGGGTTG ACGAAGATGG CAATGAAGCC AATAAACGCC ATAGTCGTCG TCTCGAGCTA CTTCATGAAA ACTTTCGAGA GCCACCAGAA AAATGGCGGC GCGTTGCTGT GAAAGATATT GATGAATTCG TTACCTGCTG TTTCACCGAA CAGGGTTGTA AAGACTACCT GGCAGTCAAT GGTCACAATC TTCGCTTGCC ATTTATATAT GTAAAAAGCG GTTTCAGGAA CGCTGAATAT ATCGGCATAA GAAACTGGCT TGCTGGCATT CGCATCAAAG GAGAGTGA
|
Protein sequence | MSEINYQALR EKAEKATKGS YIVGHTSVNQ HGNLTGVFVC QKWKGEPGGV IAECHVNCLV ETDVQAYANA EFIAAFNPNV ALALLDERER NQQYIKRRDQ ENEEIALTVG KLRVELEAAK SKLNEQREYY EGVIADGSKR IAELEKQCAE WERKALSNFE ECAAMAERIE EMQTKSAPDS FGIIGENIRT QDNRITSDPM FCVYQKREIA VDADYDHDRI VWVDEDGNEA NKRHSRRLEL LHENFREPPE KWRRVAVKDI DEFVTCCFTE QGCKDYLAVN GHNLRLPFIY VKSGFRNAEY IGIRNWLAGI RIKGE
|
| |