| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3108 |
|---|
| Symbol | |
|---|
| ID | 6967339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2884452 |
|---|
| End bp | 2885588 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643386934 |
|---|
| Product | von Willebrand factor type A domain protein |
|---|
| Protein accession | YP_002271402 |
|---|
| Protein GI | 209396016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.708549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.744851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC TGAACGATCT TCTGACCACC CGTGAGCTAC AACGCTGGCG ATTAATTCTT
GGCGAAGCGG CAGAAACGAC GCTTTGTGGG CTGGATGACA ACGCCCGGCA GATAGACCAC
GCGCTGGAGT GGCTGTATGG GCGCGATCCT GAACGGCTCC AGCGTGGTGA ACGCTCCGGT
GGATTAGGTG GCTCAAATCT CACCCCCCCT GAGTGGATCA ACAGTATTCA CACGCTGTTT
CCGCAACAGG TGATTGAGCG GCTGGAAAGC GATGCCGTAC TGCGCTACGG CATTGAAGAT
GTGGTGACGA ATCTCGACGT GCTGGAACGT ATGCAGCCTT CTGAAAGCCT GCTACGCGCC
GTTTTGCACA CCAAACATCT GATGAACCCC GAAGTACTGG CTGCCGCCCG CCGGATAGTG
CGCCAGGTTG TTGAAGAAAT TATGGCTCGA CTGGCAAAGG AAGTTCGTCA GGCTTTTTCT
GGTGTCCGCG ATCGCCGTCG CCGCTCATCT ATTCCACTGG CGCGAGACTT TGATTTCAAA
AGTACTCTTC GCGCCAATCT GCAACACTGG CACCCGCAAC ACGGCAAGTT GTATATCGAA
TCCCCCCGCT TTAACAGCCG AATTAAGCGC CACAGTGAAC AATGGCAACT GGTCTTACTG
GTTGATCTAA GCGGATCGAT GGTCGATTCG GTGATCCACT CTGCGGTAAT GGCGGCCTGT
TTGTGGCAGT TACCCGGCAT TCGTACCCAT CTGGTGGCGT TTGACACCAG TGTCGTTGAT
CTCACGGCAG ACGTTGCCGA TCCGGTAGAG TTATTAATGA AAGTACAGTT GGGCGGCGGG
ACCAATATCG CCAGTGCCGT GGAGTATGGG CGGCAACTTA TTGAACAACC AGCAAAAAGC
GTCATTATCC TCGTGAGTGA TTTTTATGAA GGGGGTTCAT CATCATTGCT GACGCATCAG
GTGAAAAAGT GTGTCCAGAG CGGCATCAAA GTGCTGGGGC TGGCAGCGCT CGACAGCACC
GCAACGCCTT GCTATGACCG CGATATGGCC CAGGCGCTGG TTAATGTTGG CGCACAAATA
GCCGCAATGA CACCGGGTGA ACTGGCTACC TGGCTTGCGG AGAATTTGCA GTCATGA
|
|---|
| Protein sequence | MSELNDLLTT RELQRWRLIL GEAAETTLCG LDDNARQIDH ALEWLYGRDP ERLQRGERSG
GLGGSNLTPP EWINSIHTLF PQQVIERLES DAVLRYGIED VVTNLDVLER MQPSESLLRA
VLHTKHLMNP EVLAAARRIV RQVVEEIMAR LAKEVRQAFS GVRDRRRRSS IPLARDFDFK
STLRANLQHW HPQHGKLYIE SPRFNSRIKR HSEQWQLVLL VDLSGSMVDS VIHSAVMAAC
LWQLPGIRTH LVAFDTSVVD LTADVADPVE LLMKVQLGGG TNIASAVEYG RQLIEQPAKS
VIILVSDFYE GGSSSLLTHQ VKKCVQSGIK VLGLAALDST ATPCYDRDMA QALVNVGAQI
AAMTPGELAT WLAENLQS
|
|---|
| |