Gene ECH74115_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1972 
Symbol 
ID6969532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1865718 
End bp1866356 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content43% 
IMG OID643385898 
ProductNmrA family protein 
Protein accessionYP_002270387 
Protein GI209397780 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.570171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG TACTCATTCT TGGTGCTGGC GGTCAGATAG CCCGCCATGT GATTAATCAA 
CTGGCAGATA AACAAACCAT TAAACAAACT TTATTTGCTC GTCAGCCAGC AAAAATACAC
AAACCCTATC CAACTAATAG CCAGATTATT ATGGGGGATG TACTGAATCA TGCAGCACTG
AAGCAGGCCA TGCAGGGACA GGATATTGTG TATGCCAACC TTACGGGGGA AGATTTAGAT
ATTCAGGCAA ATTCAGTGAT CGCTGCGATG AAAGCCTGTG ATGTTAAACG TCTGATCTTT
GTTCTTTCCC TCGGCATTTA TGATGAAGTT CCAGGAAAAT TTGGCGAATG GAATAATGCA
GTTATTGGTG AGCCCCTAAA ACCATTCCGC AGGGCTGCGG ATGCAATTGA GGCTTCTGGA
CTGGAATATA CAATTCTTCG CCCTGCCTGG CTGACGGATG AAGATATTAT TGATTATGAG
CTTACCTCAC GCAATGAACC ATTCAAAGGT ACGATCGTAT CACCTAAGAG TGTCGCAGCA
TTAATTACAG ATATCATCGA TAAACCTGAG AAACACATTG GTGAGAATAT AGGCATCAAT
CAACCCGGGA CTGATGGCGA CAAGCCATTC TTCATGTAA
 
Protein sequence
MKNVLILGAG GQIARHVINQ LADKQTIKQT LFARQPAKIH KPYPTNSQII MGDVLNHAAL 
KQAMQGQDIV YANLTGEDLD IQANSVIAAM KACDVKRLIF VLSLGIYDEV PGKFGEWNNA
VIGEPLKPFR RAADAIEASG LEYTILRPAW LTDEDIIDYE LTSRNEPFKG TIVSPKSVAA
LITDIIDKPE KHIGENIGIN QPGTDGDKPF FM