Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1972 |
Symbol | |
ID | 6969532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1865718 |
End bp | 1866356 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643385898 |
Product | NmrA family protein |
Protein accession | YP_002270387 |
Protein GI | 209397780 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.570171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG TACTCATTCT TGGTGCTGGC GGTCAGATAG CCCGCCATGT GATTAATCAA CTGGCAGATA AACAAACCAT TAAACAAACT TTATTTGCTC GTCAGCCAGC AAAAATACAC AAACCCTATC CAACTAATAG CCAGATTATT ATGGGGGATG TACTGAATCA TGCAGCACTG AAGCAGGCCA TGCAGGGACA GGATATTGTG TATGCCAACC TTACGGGGGA AGATTTAGAT ATTCAGGCAA ATTCAGTGAT CGCTGCGATG AAAGCCTGTG ATGTTAAACG TCTGATCTTT GTTCTTTCCC TCGGCATTTA TGATGAAGTT CCAGGAAAAT TTGGCGAATG GAATAATGCA GTTATTGGTG AGCCCCTAAA ACCATTCCGC AGGGCTGCGG ATGCAATTGA GGCTTCTGGA CTGGAATATA CAATTCTTCG CCCTGCCTGG CTGACGGATG AAGATATTAT TGATTATGAG CTTACCTCAC GCAATGAACC ATTCAAAGGT ACGATCGTAT CACCTAAGAG TGTCGCAGCA TTAATTACAG ATATCATCGA TAAACCTGAG AAACACATTG GTGAGAATAT AGGCATCAAT CAACCCGGGA CTGATGGCGA CAAGCCATTC TTCATGTAA
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Protein sequence | MKNVLILGAG GQIARHVINQ LADKQTIKQT LFARQPAKIH KPYPTNSQII MGDVLNHAAL KQAMQGQDIV YANLTGEDLD IQANSVIAAM KACDVKRLIF VLSLGIYDEV PGKFGEWNNA VIGEPLKPFR RAADAIEASG LEYTILRPAW LTDEDIIDYE LTSRNEPFKG TIVSPKSVAA LITDIIDKPE KHIGENIGIN QPGTDGDKPF FM
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