| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1760 |
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| Symbol | |
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| ID | 6971579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1689811 |
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| End bp | 1690557 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643385710 |
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| Product | porcine attaching-effacing associated protein |
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| Protein accession | YP_002270202 |
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| Protein GI | 209399779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4588] Accessory colonization factor AcfC, contains ABC-type periplasmic domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000702391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0238437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTT TTTTAATATT CCTGTCTTCT GCTGCTTATG CTGATATCAA TCTGTATGGT
CCTGGTGGCC CGCATACAGC CTTGCTTGAT GCAGCCAAAC TTTATGCCGA AAAAACAGGT
ATTATAGTGA ACGTTCATTA CGGCCCACAG AACAAATGGA ATGAAGATGC CAAAAAAAAT
GCAGATATCT TGTTTGGCGC ATCAGAACAA TCTGCTCTGG CTATCATTCG GGACCATAAA
GACAGCTTCA GTGAAAAAGA TATTCAGCCT CTTTATCTGC GAAAAAGTAT TTTACTGGTA
AAGAAAGGTA ATCCTAAAAA TATCCGGAGT ATTGACGACC TGACCAGACC TGGGATTGGC
GTAATTGTTA ATGATGGTGG TGGTACCAGT AATACATCAG GCACTGGCGT CTGGGAAGAT
ATTGCCGGAC GTAAAGGGAA TATAGAAACT GTCGCCGCAA TCCGAAAAAA TATTATTTTA
TATGCGCCCA ATAGCGGAAC TGCACGTAAG GCTCTTGAGA ATCAGCCTGG AGCAGATGTC
TGGATAACCT GGGCTGACTG GGCAGCCAGT AATCCAGAAA TTGGTGATGT CGTGGAAATA
GCGCCAGACT ACGTGATATG GCGTGATATG AACATTACAG TACGTCAGGA TGCAAATGAT
GAAACCCGTC GATTTGCAGA ATGGCTACAA ACCGATGAAG CGGCGCCTGC ATTCAAAAAA
TATGGCTGGA CCAGGAAAGG CACTTGA
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| Protein sequence | MAGFLIFLSS AAYADINLYG PGGPHTALLD AAKLYAEKTG IIVNVHYGPQ NKWNEDAKKN
ADILFGASEQ SALAIIRDHK DSFSEKDIQP LYLRKSILLV KKGNPKNIRS IDDLTRPGIG
VIVNDGGGTS NTSGTGVWED IAGRKGNIET VAAIRKNIIL YAPNSGTARK ALENQPGADV
WITWADWAAS NPEIGDVVEI APDYVIWRDM NITVRQDAND ETRRFAEWLQ TDEAAPAFKK
YGWTRKGT
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