Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1556 |
Symbol | |
ID | 6971489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1519050 |
End bp | 1519787 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643385523 |
Product | tail assembly protein |
Protein accession | YP_002270017 |
Protein GI | 209399408 |
COG category | [R] General function prediction only |
COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.269135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000129562 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTCTATA GCAATATATT GGCGCACGCC CGGCGATGTG CACCAGCGGA GTCGTGCGGC TTCGTGGTGA GAACGCCGGA AGGGGAAAGA TATTTTCCCT GCGTGAATAT CTCCGGTGAG CCGGAAGATT ATTTCCGGAT GTCGCCGGAG GACTGGCTGC GGGCAGAAAT GCAGGGGGAG ATTGTGGCAC TGGTCCACAG CCACCCCGGT GGTCTGCCCT GGCTGAGCGA GGCCGACCGG CGGCTGCAGA TAAAAAGTGC ACTGTCCTGG TGGCTGGTCT GCCGGGGGGA AATTCATAAA TTCCGCTGTG TGCCACATCT GACAGGACGG CGCTTTGAGC ACGGGGTGAC GGACTGTTAC ACGCTGTTCC GGGATGCCTA CCATCTGGCG GGAATTGATA TGCCGGATTT TGAGCGTGAG GATGACTGGT GGCGCAACGG TCAGAACCTT TACCTGGACA ATATGGCGGT CACCGGCTTT TACCGGGTGC CCCTGTCCTC TGCACAGGCG GGCGATATCC TGCTGTGCTG CTTTGGCGCA TCGGTGGCCA ATCATGCCGC CATATACTGC GGCAACGGTG AACTGCTTCA CCATCTGCCT GAACAACTGA GTAAACGGGA GAGGTATTCC GAAAAATGGC AACGACGAAC GCATTCAGCC TGGCGTCACC GCCACTGGCA CGTATCTGCC TTCACGGGGA TTTACAACGA TTTGGCCGCC GCCTCAGCCT GTACGTGA
|
Protein sequence | MLYSNILAHA RRCAPAESCG FVVRTPEGER YFPCVNISGE PEDYFRMSPE DWLRAEMQGE IVALVHSHPG GLPWLSEADR RLQIKSALSW WLVCRGEIHK FRCVPHLTGR RFEHGVTDCY TLFRDAYHLA GIDMPDFERE DDWWRNGQNL YLDNMAVTGF YRVPLSSAQA GDILLCCFGA SVANHAAIYC GNGELLHHLP EQLSKRERYS EKWQRRTHSA WRHRHWHVSA FTGIYNDLAA ASACT
|
| |