Gene ECH74115_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1556 
Symbol 
ID6971489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1519050 
End bp1519787 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content58% 
IMG OID643385523 
Producttail assembly protein 
Protein accessionYP_002270017 
Protein GI209399408 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.269135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000129562 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTATA GCAATATATT GGCGCACGCC CGGCGATGTG CACCAGCGGA GTCGTGCGGC 
TTCGTGGTGA GAACGCCGGA AGGGGAAAGA TATTTTCCCT GCGTGAATAT CTCCGGTGAG
CCGGAAGATT ATTTCCGGAT GTCGCCGGAG GACTGGCTGC GGGCAGAAAT GCAGGGGGAG
ATTGTGGCAC TGGTCCACAG CCACCCCGGT GGTCTGCCCT GGCTGAGCGA GGCCGACCGG
CGGCTGCAGA TAAAAAGTGC ACTGTCCTGG TGGCTGGTCT GCCGGGGGGA AATTCATAAA
TTCCGCTGTG TGCCACATCT GACAGGACGG CGCTTTGAGC ACGGGGTGAC GGACTGTTAC
ACGCTGTTCC GGGATGCCTA CCATCTGGCG GGAATTGATA TGCCGGATTT TGAGCGTGAG
GATGACTGGT GGCGCAACGG TCAGAACCTT TACCTGGACA ATATGGCGGT CACCGGCTTT
TACCGGGTGC CCCTGTCCTC TGCACAGGCG GGCGATATCC TGCTGTGCTG CTTTGGCGCA
TCGGTGGCCA ATCATGCCGC CATATACTGC GGCAACGGTG AACTGCTTCA CCATCTGCCT
GAACAACTGA GTAAACGGGA GAGGTATTCC GAAAAATGGC AACGACGAAC GCATTCAGCC
TGGCGTCACC GCCACTGGCA CGTATCTGCC TTCACGGGGA TTTACAACGA TTTGGCCGCC
GCCTCAGCCT GTACGTGA
 
Protein sequence
MLYSNILAHA RRCAPAESCG FVVRTPEGER YFPCVNISGE PEDYFRMSPE DWLRAEMQGE 
IVALVHSHPG GLPWLSEADR RLQIKSALSW WLVCRGEIHK FRCVPHLTGR RFEHGVTDCY
TLFRDAYHLA GIDMPDFERE DDWWRNGQNL YLDNMAVTGF YRVPLSSAQA GDILLCCFGA
SVANHAAIYC GNGELLHHLP EQLSKRERYS EKWQRRTHSA WRHRHWHVSA FTGIYNDLAA
ASACT