Gene ECH74115_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1340 
Symbol 
ID6966984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1347186 
End bp1348043 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content54% 
IMG OID643385324 
ProductISSfl3 OrfC 
Protein accessionYP_002269819 
Protein GI209400644 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCT CGCTTCTCAG TACCACCAGT GACCCTGAAC AGCTTCGCGC TCTGGCAATT 
GCCATGGTGC AAAAAGTCAT GGCTGAGAAT GCAGAACTTC AGAACCGTAT CCGCATCCTG
GAAGAGCAGA TGAAGCTCGC ACGCCAGCAG CGTTTCGGTA AAAAATGCGA ATCGCTGGCC
GGGATGCAGC GTTCCCTGTT CGAAGAGGAT GTTGACGCGG ATATCGCAGA AATCTCGGCG
CATCTGGACA AACTGCTTCC TCAGACCGGG GACGAAGAAA AAACAACAAC ACGTCCTGTT
CGTAAGCCCT TGCCTTCACC TCTTCCCCGT GCTGAAAAGG TTATCCCGCC AGCTGAGGAA
CGTTGTCCTG ACTGTGATGC CCCCCTGCAC TTCATTCGCG ATGAAGTCAG CGAGAAGCTG
GAATATATTC CGGCACAGGT CGTGGTCAAC CGCTATATCC GCCCGCAGTA CAGCTGTCCC
TGCTGTGAGA AAGTGTTCAG CGGAAAAATG CCGGCACATA TCCTTCCGAA AAGTGCTGTT
GAGCCATCGG TCATCGCACA GGTTGTCATC AGCAAATATA CCGACCATCT GCCCCTGTAT
CGCCAGCAGC ACATTTTCTC CCGAATGGGG GTGGAGCTCC CCGTCAGTAC AATGGCGGAT
ATGGTCGGTG TTGCTGGCGC TGCACTGGCC CCGCTGGCAA AATTGTTACG CCACGAGCTT
CTGACACGGG ATGTTATTCA TGCAGATGAA ACGTCCCTGA GGCTCCTTGA TACCCGGAAA
GGCGGTAAAT CCTGCTCCGG CTGGCTGTGG GCTTACGTCA GCGGAGAAAG AGTAAGCGTC
AACGGAGCAC CGTATTGA
 
Protein sequence
MDISLLSTTS DPEQLRALAI AMVQKVMAEN AELQNRIRIL EEQMKLARQQ RFGKKCESLA 
GMQRSLFEED VDADIAEISA HLDKLLPQTG DEEKTTTRPV RKPLPSPLPR AEKVIPPAEE
RCPDCDAPLH FIRDEVSEKL EYIPAQVVVN RYIRPQYSCP CCEKVFSGKM PAHILPKSAV
EPSVIAQVVI SKYTDHLPLY RQQHIFSRMG VELPVSTMAD MVGVAGAALA PLAKLLRHEL
LTRDVIHADE TSLRLLDTRK GGKSCSGWLW AYVSGERVSV NGAPY