Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1100 |
Symbol | |
ID | 6970853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1130696 |
End bp | 1131235 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643385111 |
Product | fimbrial protein |
Protein accession | YP_002269610 |
Protein GI | 209396269 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.159551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.51089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA GTGTATTGAC GGCGTTTATA ACTGTGGTAT GTGCAACGTC CAGCGTTATG GCTGCTGATG ATAATGCTAT CACGGATGGC TCAGTAACAT TTAATGGTAA AGTTATTGCT CCAGCTTGTA CCCTGGTAGC TGCGACGAAA GATTCCGTGG TGACTTTGCC AGATGTTAGT GCCACGAAGT TGCAAACCAA TGGTCAGGTT TCTGGCGTGC AAACTGATGT GCCAATTGAA TTAAAAGATT GTGATACTAC CGTAACAAAA AATGCAACGT TCACCTTTAA TGGCACTGCG GATACTACTC AGATTACAGC GTTTGCTAAC CAGGCCTCAT CTGATGCTGC TACAAACGTG GCCCTGCAAA TGTATATGAA TGATGGTACA ACGGCCATCA AGCCAGACAC AGAAACCGGG AACATTTTGT TGCAAGATGG AGATCAGACG TTGACTTTTA AAGTTGATTA TATCGCTACG GGGAAAGCGA CTTCTGGTAA TGTGAATGCG GTAACAAATT TCCATATTAA CTATTATTAA
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Protein sequence | MKKSVLTAFI TVVCATSSVM AADDNAITDG SVTFNGKVIA PACTLVAATK DSVVTLPDVS ATKLQTNGQV SGVQTDVPIE LKDCDTTVTK NATFTFNGTA DTTQITAFAN QASSDAATNV ALQMYMNDGT TAIKPDTETG NILLQDGDQT LTFKVDYIAT GKATSGNVNA VTNFHINYY
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