Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0322 |
Symbol | |
ID | 6966871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 327536 |
End bp | 328435 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643384383 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002268898 |
Protein GI | 209400952 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.785134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCG ATCTTAATCT TTTACCCATT TTTATCGCGG TAGCAGAAGA GAGTAATTTT AGTAAAGCCG CCGCACGGCT GGGCGTTACC CGTTCAGCGG TCAGTCAGGG AATAAGACGC CTTGAAGATG CATTCGGGAC AATGCTTGTA ATGCGGACCA CGCGCTCAGT TAATTTGACA GAAGCGGGAG AACGGCTGCA TAAATCGCTG TCATTACCTT TATCCGGTAT TGAGGCAGCG TTCGAAGAGA TGGTTTCTGA CCATGTGCCA CGCGGACTTC TCAGAATCGC GGTGACGTCA ATAGCTGAAG AATTTCTTTC AGGTCCGCTA ATCGCTTCGT TTGCAGCAGC CAATCCAGCC GTTACGCTTG ATATTGTTGT CACGGATGAG GAATTCGATA TCGTGGCCGC AGGTTACGAT GCTGGCGTAA GGCTCGGAGA GGTCATTGAA AAAGACATGA TTGCTGTGCC CCTTACCGGC AGGCAGCGTG AAATGGTCGT TGCCTCTCCC TCCTATCTCG CAGCCAACAG CACACCTGTT CATCCGCGTG AACTTGTGAA TCATAAGTGT ATCGGCTGGC GTCAGTCCCC GGAGGTTGCG CCTTATCGCT GGCCATTTGA AGAAAACGGG AGAGCTTTCG ACCTTGCGAT TGAACCGCAG ATTACGACTA ATGATCTGCG TCTGATGTTG AGGCTGGCTC TTGCCGGCGG AGGAATAACA ATTGCCACTC AGGAAACTTT CAGGCCGTAT ATTGAAAGCG GTAAGCTTGT ATCTCTGCTT GATGACTTTC TTCCACAATT TCCGGGCTTC TATCTGTATT TCCCACAGCG TCGCAATATT GCACCAAAGC TCCGCGCTCT GATTGACCAC GTTAAGGAAT GGCGGCAGCA ATTGGCTTAA
|
Protein sequence | MKIDLNLLPI FIAVAEESNF SKAAARLGVT RSAVSQGIRR LEDAFGTMLV MRTTRSVNLT EAGERLHKSL SLPLSGIEAA FEEMVSDHVP RGLLRIAVTS IAEEFLSGPL IASFAAANPA VTLDIVVTDE EFDIVAAGYD AGVRLGEVIE KDMIAVPLTG RQREMVVASP SYLAANSTPV HPRELVNHKC IGWRQSPEVA PYRWPFEENG RAFDLAIEPQ ITTNDLRLML RLALAGGGIT IATQETFRPY IESGKLVSLL DDFLPQFPGF YLYFPQRRNI APKLRALIDH VKEWRQQLA
|
| |