Gene ECH74115_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0247 
Symbol 
ID6966569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp262921 
End bp263421 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content50% 
IMG OID643384317 
Producthypothetical protein 
Protein accessionYP_002268833 
Protein GI209397057 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.788284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA AATTTGAAGG CAGCGTCGCG CCTCGCGAAC GTATTAATAT ATCGTATGTC 
CCAAAAACAG ATGGCCAGAC GGCTGAAGTG GAACTTCCGC TTAACATGCT CGTTGTCGGC
GATACCGGAA ATACGCAGGA AACATCCTCA CTGGATGAAC GTCAGGCAGT TTCCGTTAAC
AAGCACAATT TCGGTGCAGT GATGGCTGAA GCAGCCATTG GCCTCAATTT TACCGTCCCC
GCCACGCTGA AGGGAAGCAC AACGGACGAT GAAATGAATG TGGCGCTGAA TATCAAGTCA
CTGGATGATT TTTCACCAGA TAGCGTGGCC CGGCAGGTTC CGGAAGTGAA TAAATTGCTG
GAACTGCGTG AAGCACTGAC TGCACTGAAG GGGCCGATGG GTAACCTTCC GGCATTCCGT
ACCCAGCTCC AGGCATTGCT GGAAAATGAA GAGTCCCGCG AGCAGTTGCT CAAAGAAATC
GGCCAGGTGA GCAATAAATA A
 
Protein sequence
MSKKFEGSVA PRERINISYV PKTDGQTAEV ELPLNMLVVG DTGNTQETSS LDERQAVSVN 
KHNFGAVMAE AAIGLNFTVP ATLKGSTTDD EMNVALNIKS LDDFSPDSVA RQVPEVNKLL
ELREALTALK GPMGNLPAFR TQLQALLENE ESREQLLKEI GQVSNK