| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_A0014 |
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| Symbol | |
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| ID | 6966533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011351 |
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| Strand | + |
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| Start bp | 8901 |
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| End bp | 9680 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643384045 |
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| Product | conjugal transfer outer membrane protein TraH |
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| Protein accession | YP_002268524 |
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| Protein GI | 209395671 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA AGTCGGGTCT TATCGGTTGC TTATCTTTAC TGGCTGTTTG TGCATCTCCG
GCAACAATTG CGGCAACATA TGGTCAGGGG TCAGCATTTG ACTCCAGGAT TCAAAGTGTT
GTTTTTAATG AAAACGATGT TGTTAATGTA AGAGTAAAGA AAGGTGCTGT TTCGGTAGTT
CAAATCGCCA AAGATGAAAC GATTAAAGAT GTTGGCCTGG GTGATCCCGC TGCATGGAAG
GTGTCCGTTC GTGAACATAC TGTCTTCTTT CGTCCGGCAG TAGAAGACAA TCCAAGCACG
AACGTTACTA TTGTAACGGA TAAACACACG TACTCATTGT ACCTTACGGA AGTGTCCAGT
AATCCGACAT ACGTTTTGCG ATATGACTAT CCTAAACCTG TAACAGCCAA AGTATTTACG
GAGAAAAAAT ATCCCTGCAC TGATGGTGGT GTAATTAATG GACACTATCA ATTAAAAGGG
AGTAAGAGCA TTTTCCCTTA CCAGGTTTGG GACGACGGTA CATTCACCTG TATGCGCTGG
AACAGTAAAC AGGATTTACC CGTACCTTAT CGTGTTGATG CTGATGGCAA TGAAAACCTT
GTTAATAAGC ATATGGATAA CAACACAATG GTATTGCATG AAGTGTCTGA TAATTTCCGC
CTGAGAATAG GCGATCAAGT TGTTAATGTA AGAACATCTT CGACAGTTCC TAAAATGTGG
AATAAAAAAG GCACTACAAA TGGAAAGGTA AGGGTGGAGA AATTTAATTA TGAAAAATGA
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| Protein sequence | MIKKSGLIGC LSLLAVCASP ATIAATYGQG SAFDSRIQSV VFNENDVVNV RVKKGAVSVV
QIAKDETIKD VGLGDPAAWK VSVREHTVFF RPAVEDNPST NVTIVTDKHT YSLYLTEVSS
NPTYVLRYDY PKPVTAKVFT EKKYPCTDGG VINGHYQLKG SKSIFPYQVW DDGTFTCMRW
NSKQDLPVPY RVDADGNENL VNKHMDNNTM VLHEVSDNFR LRIGDQVVNV RTSSTVPKMW
NKKGTTNGKV RVEKFNYEK
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