Gene VSAL_II1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II1028 
Symbol 
ID6962340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp1126724 
End bp1127530 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content41% 
IMG OID643382276 
Producthypothetical protein 
Protein accessionYP_002265307 
Protein GI209809768 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA AGGTTATCCT TGTTGTTCTT GATGGACTTA ATTACCAAGT AGCCCGCGAT 
TGTATGGGCT ACTTAAATGG GTTAATTGAG CACCAAAGAA CAACGCTATA TAAAATTCAA
TCTGAATTGC CGTCGATGTC TCGCCCACTC TATGAGTGCC TACTCACCGG TGTGTCTCCA
GTCGAAAGTG GCATTGTAAA CAACAATATA GTGCGTTTAT CTCATCATGA ATCGGTATTC
AGCTTAGCCA GAAAACAAGG GCTAAAAACA GCGGCTGCCG CTTATCATTG GGTCAGCGAA
CTTTATAATA TCGCCCCTTA TCATGCAGTA CGTGATCGCT TTACTGATGA TGAAAATCTG
AATATTCAAC ATGGTTGTTT TTATCATTGG GATCACTATC CAGATGAAGC ATTATTTCTA
GATGCAGAGC ACCTTCGTCA TACTCACCAA CCCAATTTCT TATTAATTCA CCCAATGAAC
ATTGATGATA TTGGACATAA ATTTGGCTTA GATTCTCGCC AATACAGAAA CAGCGCACGC
ATGGCCGATA TCATTCTGTC TAATTATATT GATGATTGGG TTCGCGATGG TTATCAGATC
CTCATTACCA GTGATCACGG CATGAATAAC GACTTATCAC ACGGTGGGAT CTTACCAGAA
GAACGAGAGG TTCCTTTGTT TGTCATAGGT GATTCATTTA CTCACCAAGA AGCGGTAATT
AAACAAACCG AACTTTGTGG CATGGTATGC CAGTTATTGG CACTCGACCA TGATAAACCC
TACCCTCAGG GATCATTAAC ATTATGA
 
Protein sequence
MNNKVILVVL DGLNYQVARD CMGYLNGLIE HQRTTLYKIQ SELPSMSRPL YECLLTGVSP 
VESGIVNNNI VRLSHHESVF SLARKQGLKT AAAAYHWVSE LYNIAPYHAV RDRFTDDENL
NIQHGCFYHW DHYPDEALFL DAEHLRHTHQ PNFLLIHPMN IDDIGHKFGL DSRQYRNSAR
MADIILSNYI DDWVRDGYQI LITSDHGMNN DLSHGGILPE EREVPLFVIG DSFTHQEAVI
KQTELCGMVC QLLALDHDKP YPQGSLTL