| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0879 |
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| Symbol | |
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| ID | 6962217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 963735 |
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| End bp | 964898 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382147 |
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| Product | NifS-related protein, putative aminotransferase |
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| Protein accession | YP_002265178 |
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| Protein GI | 209809639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.35946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTTTTTC TGGATGGTCC TGGGGGCTCT CAAGTTCCTA GTTCTGTGTT GTCTGCAATG
ACTGGTTATC TAGGGTATGC AAATTCAAAC TTAGGAGGTC ACTTTTTTTC AAGCCATGTC
ACAGATGCTG TGCTTAAACA GGCTCGTCAA TCGTGTGCTG TATTTTTAAA TGCTCCGACT
GAAGATAATA TTGTGTTTGG TGCCAATATG ACGTCATTAA CGTTTCAATT GAGCCGTACG
ATCAGCCGAG CTTGGAAAGC TGGAGATGAA ATTATTGTGA CGGCATTAGA TCATTATTCT
AATGTATCAA GTTGGCAGCA AGCAGCAGAA GATAAGGGCG TTATCGTTCA CCAAGTGAGA
GTGAATCTCG ATGATTGCAC ATTGGATATG GATCATTTTT ACTCATTACT TTCACCAAAA
ACTCGCCTTG TTGCAACCAC CTATGCTTCA AATACCACGG GATCATTAGT GGATGTAAAA
TCAATGATTT TGGCAGCACA TAACGTGAAT GCAATGGTTT ATGTAGACGC AGTACATTAT
GCACCTCACC ATTTGATCGA TGTTCAAGAA CTCGATTGTG ATTTTCTTGC ATGTTCTGCC
TATAAGTTTT TTGGACCACA CGTTGGGATC GCCTATGTGT CAACAAGATG GTTAAGGGAA
TTAACCCCTT ATAAAGTTGA ACCTGCAACA AACATAGGCC CAGAGCGATT TGAAACAGGA
ACTCAGAGCT TTGAAGGTCT AGCTGGGATT GTCGCCGCTA TTGAGTATTT AGCGCAGTGG
GGAAGTGAAG GAAGCAGCTT AAGAGATAGG TTAATCGACA GTTTTGAGCA ATTTAATAAG
CATGAACTGC AATTGACTCA CTATTTTTTA AGTAAGTTAA CTTCGCGCAG TTATATTCAA
TTATATGGAA TTAAAAACAG TGAAAACCTG TGCTCTCGTA CGCCTACATT TGCGCTTAGG
TTTAGTGGTT ATACGCCCGA ATACGTAGCG ACAGTACTAG GAAAAGAAAA TGTTTGCGTA
TGGAGTGGGC ATTTTTATGC GCTAGGTTTA ATTCGTCAAT TAGTGTTGGA GGAAAGCGGT
GGTGTTGTTC GTATTGGATT AATGCATTAC AACACAACGG AAGAGATAGA TTATTTATTC
TCGTTATTAG ATTCACTCGC ATAA
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| Protein sequence | MVFLDGPGGS QVPSSVLSAM TGYLGYANSN LGGHFFSSHV TDAVLKQARQ SCAVFLNAPT
EDNIVFGANM TSLTFQLSRT ISRAWKAGDE IIVTALDHYS NVSSWQQAAE DKGVIVHQVR
VNLDDCTLDM DHFYSLLSPK TRLVATTYAS NTTGSLVDVK SMILAAHNVN AMVYVDAVHY
APHHLIDVQE LDCDFLACSA YKFFGPHVGI AYVSTRWLRE LTPYKVEPAT NIGPERFETG
TQSFEGLAGI VAAIEYLAQW GSEGSSLRDR LIDSFEQFNK HELQLTHYFL SKLTSRSYIQ
LYGIKNSENL CSRTPTFALR FSGYTPEYVA TVLGKENVCV WSGHFYALGL IRQLVLEESG
GVVRIGLMHY NTTEEIDYLF SLLDSLA
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