| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0855 |
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| Symbol | |
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| ID | 6962200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 940093 |
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| End bp | 940971 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643382126 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002265157 |
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| Protein GI | 209809618 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.776251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CTATAAAATC ACTGCCTTCT TTTGATGATA TTTATCTATT TGTGCTTGTT
GTTAGGCATA AAGGCATTAG CTCTGCAGCT AATTTCTCTG GACTACAACG CTCAAAAGTC
AGTCGTCGTT TACAAGAATT GGAAAAATGC TTAGGCCATC AACTGCTTAT TCGAACTACG
CGGGCAATAG AACTCACCCA ACAAGGTGAA TGGCTGTATC AGCAAGCGTC GAACCCAATT
AATACACTTG TCGATGCTAG TCGATTAATG AAAGAACAAC ATTTAAGCCC AAAAGGCACG
TTAAGAGTAG CTATTCCACC CGCTCTTGGA ATGACAGAGG TATTCTCACA GCTCATTGAA
CAATACATTG ATGACTACTC TGAAGTGAAA CTTGAAATAG AGCACCATGT TCAATCACTT
GATCTTCGCC GAGAGAATAT TGATCTACAA ATTTTACCAA GCTATATTGA ACCACTGCAT
GATGATTACG TTCAGCAACG TTTAATTCAA ATTCCTTACA GTATGGTTAC GTCACCAGAA
TATCTACAGA ATAATGGAAA GCCTGACAAT ATAACTCAGT TGAATAATTT TCATCTGTTA
GCCAGTCGTT ATAATAAGAG TCTTTTACCC CAAGGATTAA CGTATCATTT ATTTAGTGAT
GATCTTAATT TATTGCAAAG ATTGGCGTTA TCCGGAAAAG GGATTGCTTT ACTACCCTCA
ATATTAATAG AGGATAATAT TCAATCTGGA CAGTTAATTG AAGTTTTACC TAGGCAATCA
TTCACTGACC TTACGATTAC ATTAGTATAC CCAACACCAA GTTATTTACC TGAAAAGACA
AGAATGATGG TAAAATTATT TAGACAAAAA TTCTCATAA
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| Protein sequence | MSDTIKSLPS FDDIYLFVLV VRHKGISSAA NFSGLQRSKV SRRLQELEKC LGHQLLIRTT
RAIELTQQGE WLYQQASNPI NTLVDASRLM KEQHLSPKGT LRVAIPPALG MTEVFSQLIE
QYIDDYSEVK LEIEHHVQSL DLRRENIDLQ ILPSYIEPLH DDYVQQRLIQ IPYSMVTSPE
YLQNNGKPDN ITQLNNFHLL ASRYNKSLLP QGLTYHLFSD DLNLLQRLAL SGKGIALLPS
ILIEDNIQSG QLIEVLPRQS FTDLTITLVY PTPSYLPEKT RMMVKLFRQK FS
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