Gene VSAL_II0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0684 
Symbol 
ID6962065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp748667 
End bp749335 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content39% 
IMG OID643381962 
Productinner membrane protein 
Protein accessionYP_002265000 
Protein GI209809462 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGT TTGATTCATT TCTTTCTATT TTAACCGCCC TTTGGCAACA AGATTTTGCA 
ATACTACAAA ATCCAAGTAG TGCTGCAATG ATTTACTTCT GCCTTATTTT ATTCATTTGG 
CTAGAAAGCG CATTTATCCC TACAGCCCCA CTCCCTTGTG ATAGTGTCGT CATCCTTGCT 
GGATCTCTTG CTGCAGCAAA TGTAATTAGC TACCCTGTCA TCGTCACTGG ACTTATCATG 
GCAGCAGCCA TTGGCAGTCA ATTGGCTTTT ATTCAAGGTC GTTGGTTGCA TAAGTTTCCA 
ATGATTCAAA CATGGATAAA CGCAGTGCCA AAAAACCGAC TACAAACCGT TGATAATTTA 
TTATCAAAAC ACGGATTATT AGCATTATTT GTTGCGCGCT TTATTCCGGT TGTTCGCCCT 
CTTCTTCCAT TAATGATGGG CTTACGAATG AAGCAAGTAC GACGCTTTCA TTATTTTGCG 
TGGATTAGTG CCATCATTTG GATTTTACTG CTCACAGGCT TTGGGTATTC GTTATCTTTC 
TTACCTGAGC GCATTTCAAA AATCGTAACA ATGGTATTAA TGGCCGCACC AGTAATTACT 
CTCGCTCTTG CTATCGGCAG TTTTTTAAGT AGCTATTTTA TTAAAAAATA CCGAAAACGC 
CTCTATTAA
 
Protein sequence
MAMFDSFLSI LTALWQQDFA ILQNPSSAAM IYFCLILFIW LESAFIPTAP LPCDSVVILA 
GSLAAANVIS YPVIVTGLIM AAAIGSQLAF IQGRWLHKFP MIQTWINAVP KNRLQTVDNL 
LSKHGLLALF VARFIPVVRP LLPLMMGLRM KQVRRFHYFA WISAIIWILL LTGFGYSLSF 
LPERISKIVT MVLMAAPVIT LALAIGSFLS SYFIKKYRKR LY