| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0654 |
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| Symbol | |
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| ID | 6962041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 704823 |
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| End bp | 705620 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643381934 |
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| Product | HTH-type regulatory protein, AraC family |
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| Protein accession | YP_002264972 |
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| Protein GI | 209809434 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCCAG TTCAATTACA TGAATTCAAT TCTCAAACGA GACGAAAATC AGATCGTTAT
CCAGTTGTTC GTAATGGCAT TTTTATGATT AAATCTGGAG AACTAACCTA TCAAGATAAA
GTTGGTGAAT CTATCATTTT AAAAAGTGGG GATTTCTTAC TATACAGCTC TGATGATATA
TCCAAAATTG ACCTTTCAAC ATCATCGGGG AATTTCCACG CAGAGTCTCT TGTTATTGAT
GTGTCCGTTG TCCAAAAATT TATTAGTTAT ATTAATACTG ATGACCATTT TCGCTCCACT
CGTGAGTCCT TCGTTTTCAC ACAAGAAAAT ACCTTTATTG TTAAACTGCT TTCTTTATTA
AGAGAACAAC TCGAAGGGCA ACCCTCTCCT GAAACAATTG AATTTATGAC GTTGGCAGTC
TTAAGCGAAA TGGTCAACCA ACATCAAGAA CTGTTAGATT TCATACACCG AATTTCTGTT
TTAACCATAT CTCAACAGCT AATCCGTTAT GTCGAACAAA ATATCGCTTC AGATTTAACC
ATTGATGCTG TAGCTCCTAA ATTAGGTATG TCGGCATCAA CATTAAAAAG AAAACTACAA
TCCGATAAAT TGTCTTTTGC CAATCTAGTC AAAGTAAAAC GAATTAATTA TGCGGCAACT
CAGCTTAGAG TGACAAAGAA AACGATCACA GAAATTGCTT ACGAAACAGG ATTTAAAACC
GCCGCTCATT TCAGTACCAC TTTTAAGGCA GTTAATGGTT CTACCCCTAA AGAGTTCAGA
GAACAAATAC AAGCTTAA
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| Protein sequence | MVPVQLHEFN SQTRRKSDRY PVVRNGIFMI KSGELTYQDK VGESIILKSG DFLLYSSDDI
SKIDLSTSSG NFHAESLVID VSVVQKFISY INTDDHFRST RESFVFTQEN TFIVKLLSLL
REQLEGQPSP ETIEFMTLAV LSEMVNQHQE LLDFIHRISV LTISQQLIRY VEQNIASDLT
IDAVAPKLGM SASTLKRKLQ SDKLSFANLV KVKRINYAAT QLRVTKKTIT EIAYETGFKT
AAHFSTTFKA VNGSTPKEFR EQIQA
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