| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0544 |
|---|
| Symbol | |
|---|
| ID | 6961949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 603039 |
|---|
| End bp | 603389 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643381832 |
|---|
| Product | hypothetical protein, putative phage gene |
|---|
| Protein accession | YP_002264870 |
|---|
| Protein GI | 209809332 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.597495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTA ATTTCTACAA TTGTGATAAA GAAGTTGATA ACAATAGCCA TGATGGTGTT
GGCTCTATTG ATATTTACCG TGCATTTAGA CGTAAAGATT TTGATGGTGC TTGGGATTTT
GCTATTCGTG TCATTATGCC GCCAGGTAGT TCAATGGGGG ATCATTCTCA CGAAAATGAT
GAAGAAATGT ATATAATCCT CAAAGGTGAA GGCTCAATGA TTATTGAGGG TGAAACTAAA
CGAGTTATTG CTGGCGACAT GATTGTGAAT AAACGTTTTG GTACTCATGG CTTATTAAAT
GATTCTACCG AAGACATTGA ATTGCTAATC ATCCAAGCAA GTTTAAAGTA A
|
|---|
| Protein sequence | MIRNFYNCDK EVDNNSHDGV GSIDIYRAFR RKDFDGAWDF AIRVIMPPGS SMGDHSHEND
EEMYIILKGE GSMIIEGETK RVIAGDMIVN KRFGTHGLLN DSTEDIELLI IQASLK
|
|---|
| |