Gene VSAL_II0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0340 
Symbol 
ID6962617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp382504 
End bp383157 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content35% 
IMG OID643381639 
Producthypothetical protein 
Protein accessionYP_002264681 
Protein GI209809143 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0562312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA GTACTCGTTT AGATATCATC AAGAATAAAG TGACCGTTCA CTATGATCAT 
ATTTGGGATT GTTGTTGTGA CCATGGTCAG CTTGGTGTTG CACTATTATC ATCTCTGCCA 
CACAGTGTGA TTCATTTTGT TGATGTTGTA GATGAATTGA TGATTAACCT AGAGGCAGAG 
CTTGATAAGC ATGCCGCTGA GATTCAATCT AGATGGCAGG TGCATTGCAT GGATGTAAGC 
CAACTATCAA TCATCAATGA TCAAAAAAAT CTTATCATTA TTGCTGGGGT AGGAGGCGAG 
TTACTGATTG AACTTGTTCG TTCTATTCAA CAACGTAATA AAAATGCAGA GTTGGAATTT 
ATTCTTTGTC CGGTATTGCA CAATTATCGA GTGAGAGAAG AGCTTATAAC AATGGGTTTT 
GGATTAAATT CAGAAACCTT AGTAAAAGAG AATAAGCGTT TTTATGAAGT AATGCATGTA 
TCTAATCGTG CACTAAAACC GTTATCTAAA ACGGGGTCAG AAATGTGGAA TTCAACCGAT 
GTAGATCATC GAGAATATTT AGATAAAACA ATCGCACATT ACCAACGAAT GGAAGTAAGC 
GTAGATAAAA AAAACAAAAT TAGTGAACAA TACAAGTTGT TGTTAACTTC ATAA
 
Protein sequence
MKLSTRLDII KNKVTVHYDH IWDCCCDHGQ LGVALLSSLP HSVIHFVDVV DELMINLEAE 
LDKHAAEIQS RWQVHCMDVS QLSIINDQKN LIIIAGVGGE LLIELVRSIQ QRNKNAELEF 
ILCPVLHNYR VREELITMGF GLNSETLVKE NKRFYEVMHV SNRALKPLSK TGSEMWNSTD 
VDHREYLDKT IAHYQRMEVS VDKKNKISEQ YKLLLTS