| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0302 |
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| Symbol | |
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| ID | 6961759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 336141 |
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| End bp | 337583 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381603 |
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| Product | putative polysaccharide biosynthesis protein |
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| Protein accession | YP_002264645 |
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| Protein GI | 209809107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT TTCCTTTATC ACCCGCACTA AAAAACATGA CACTGTATGG CAGCAGTATT
ATTTTAATGA AAGGGGTTTC CTTATTCATG CTCCCTTATG TCGCTAATCA TATTCCACAA
TCAGAATTAG GCCGTTTAGA GCTATTGTCA ACGTTCGCGA TGATATTAAG TGTCATATTA
GGCTTATCAC TTCACGAAGC GTTATATCGA TTTGCAGGCG CAGAACAAGA CCCACATCAA
AAACGAAAAA TAACCGCCGA GATCTTCACC TTAACCATGA TTGTTGCTTG TATTTCTTTG
CCCATCATTT GGTTAATCAG CCCTTTTATC AGTGAAATTA AGCCAGAATA CGCCACAACT
ATTGAGCTTG AATTATTATT GATGGTATTG GCGTTTGAAG GGGTAGTTGC CGTCGTTCTT
GCCTCCCTAA GAATGCGAGA CAAAGCGGGT TTATTTTTTA TCATCACAAC AGGGCGCGCT
TTTTTACAAG TGGTATTAAC CGTCGCCGTG CTACAACAAG GTTATGGCGT TACCGCCATT
TTATTGGTTG GTTTTATCGC TGCGAGTCTT CAAATTATCG CGTTAATTTA TCTTCAAGTA
AAAGAAAATA AGAAGGTTAA CAATACCTCT CACATCTATA ATCCAGAAAG GATATCACAG
TGTTTACATT ACGCTTTACC CCTAACCGCC AGTGGACTCA TAGCCTTTGG TTTAAACGGA
TTTGAACGCT GGGTACTAGT TGATAACACC TCATTAAATG ACGTTGCTCT TTATGCGGTG
GCTCTAAAAT TCTCACTCGC ATTGACCTTG TTAATGCAGC CTTTCTGCAT GTGGTGGATG
CCAAAACGCT TTGATTATTT ACAAGCTAAA GGAGAAGACA TTACAGCAAA AATGACACAA
ACCAGTTTGG TATTGTTATG CACTTTAACC ATCATCGTCA GCTATTTAGC ACCGTTACTT
ATCGAAGCAT TAATGCCAGT CAGCTACCTC CAAGCAAAAT CCATCGTGAT TGCCTTGATC
ATCGTTGCGG CAATTAAAGA AATGAATGAA CTCATCAACA TTGGCGCACT AGCAAAGAAA
GAAACAAAAA AATTATTATG GATTAATAGC TTATCGACTG CTTTGGGGAT GTTCTTAATC
ATTATGTTCA CCCCTAATTA TGGCATGACA GGCGTTCTAG GTTCATTAAT CGTCGCACAG
AGTATCAGAA TGGTCGCTAC CTATTTTCTT TCTCAACGCA GTCATTTATT ACCTTATTCA
CTGAAAAAAA TGACCCTATT ATTTATATTT ACGGGAGGTT CTGTACTACT TAGTTTGTCT
GGATTATCAA GCATGATGCA TCTGTTACTC GGCATTGCAT GTACCGTAAT CTGCGTATTT
ATCGCTTCTA TACTAAAATT AATTATCTTG CCTGACAGCA AAGAAGATAA AGAGGTTTTA
TGA
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| Protein sequence | MNLFPLSPAL KNMTLYGSSI ILMKGVSLFM LPYVANHIPQ SELGRLELLS TFAMILSVIL
GLSLHEALYR FAGAEQDPHQ KRKITAEIFT LTMIVACISL PIIWLISPFI SEIKPEYATT
IELELLLMVL AFEGVVAVVL ASLRMRDKAG LFFIITTGRA FLQVVLTVAV LQQGYGVTAI
LLVGFIAASL QIIALIYLQV KENKKVNNTS HIYNPERISQ CLHYALPLTA SGLIAFGLNG
FERWVLVDNT SLNDVALYAV ALKFSLALTL LMQPFCMWWM PKRFDYLQAK GEDITAKMTQ
TSLVLLCTLT IIVSYLAPLL IEALMPVSYL QAKSIVIALI IVAAIKEMNE LINIGALAKK
ETKKLLWINS LSTALGMFLI IMFTPNYGMT GVLGSLIVAQ SIRMVATYFL SQRSHLLPYS
LKKMTLLFIF TGGSVLLSLS GLSSMMHLLL GIACTVICVF IASILKLIIL PDSKEDKEVL
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