| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0267 |
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| Symbol | |
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| ID | 6961729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 294891 |
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| End bp | 295898 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643381572 |
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| Product | HTH-type transcriptional regulator, AraC family |
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| Protein accession | YP_002264614 |
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| Protein GI | 209809076 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.128312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAG TTCGAAGTGG TGCTTTAGAT GGCTATGAAA AATTAGTACA GCGCCTCGGT
AGAAACCCTA TTCATATCAT GTCAGAAGTG GGATTAAGTA CTGCGTTATT ACGAGATCCA
AATATGTATC TCTCTTATTC AAAAGTGTCA GAATTATTAG AAATCACCGC GTCACATTGT
GATGAACCTT TATTTGGTTT GTTGTTATCT GAAGCGCAAA GTAATTTAAC GATTGGTGAT
CTTGGGTTAA CAGCGACTCA GCAATTAACT ATTTTTGATG CCATTGTTCA TATTAAAAAA
TACATCTATC TTCATGCGGA TGGAGTTAAT ATAAATACAA TAAGATCCGG TCTTAAAGCC
ACGGTTATTA TTGATTTTTC TTTTGATGGA ATAAGAGGGA ATAATCAACT TACCCAATTA
AGTGTGGGGT TAATTTATAA TAATTTACGT TATTTAACGG GGAATCATGA ATCAAATTTC
TATTTATCTT TAAAGCAGAT TAAACCCGAG ATTCAACATG AGAGCATGCT AGGGTATTTT
AAGGAGGGCA TTCAGTTTTC TGCGGTGCAT GATGCGGTCA CTTTTTCTTC TGAATGGCTA
GATAAATCAC CTCATTTTGA ACAATATCAA ATACGTGAAT GTCTTCAAAA AAACATCCAA
GAATTAAAAA AACACTACCC ATCAGATCTT AGATATCAAG TGAGTATGGT GATCAAAAGC
TTGCTGTCTT CGTCAGAATG TTCGCTTGAA TTAGTCGCTA ATGCATTAAA TATTCATCCG
AGAAGTTTAC AAAATCAGCT CAAATCTGAA TCATTAACTT ACGGAGGAAT ATTGCAATCA
ATACGAAAAG AAATCGCTAT TGAGCAGCTG TGTGATCCAA GCTGCTCCAT CACTGAATTA
GCGTTGAGTT TGGGTTACGC GGAAGTGTCT ATTTTCTCGC GTAACTTCAA ACAATGGTTT
GGGGTATCAC CAAAGGAATA TAAATCTAAC GCAGTAAATA AAAAGTAA
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| Protein sequence | MFLVRSGALD GYEKLVQRLG RNPIHIMSEV GLSTALLRDP NMYLSYSKVS ELLEITASHC
DEPLFGLLLS EAQSNLTIGD LGLTATQQLT IFDAIVHIKK YIYLHADGVN INTIRSGLKA
TVIIDFSFDG IRGNNQLTQL SVGLIYNNLR YLTGNHESNF YLSLKQIKPE IQHESMLGYF
KEGIQFSAVH DAVTFSSEWL DKSPHFEQYQ IRECLQKNIQ ELKKHYPSDL RYQVSMVIKS
LLSSSECSLE LVANALNIHP RSLQNQLKSE SLTYGGILQS IRKEIAIEQL CDPSCSITEL
ALSLGYAEVS IFSRNFKQWF GVSPKEYKSN AVNKK
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