| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0178 |
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| Symbol | |
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| ID | 6961649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 203420 |
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| End bp | 204292 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381496 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002264538 |
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| Protein GI | 209809000 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCTT TGGACACTGA TTTACTTAAA ACCTTCTTAG AAGTGACAAA AACGCGTCAC
TTTGGCCGTG CTGCTGAGCA CTTATTTCTC ACTCAATCCG CGGTCAGTTT TAGGGTTCGA
CAATTAGAAT CTCAGCTAGG TAATCCTCTG TTTACTCGTC AGCGCCATAA CGTTCAGTTA
ACGGCAGCCG GAGAGCGATT ATTACCCTAT GCTGAAGCCA TTTTACAAAC GTGGGGCAGG
GCAAAACAAG ATGTCGCATT AACTGAGGAT TACAATTCTC AAATCGCCAT TGGAGCGAGC
CCACTGTTTT GGGAATTTGA TGGTATTTCC GATTGGATCA ATGGCATTTA TGCGTCTATT
CCCGGCCTTG CTTTGCGCTT AGAATCGATT CGTCGCCAAG ATTTATCAAA ATCTTTACTT
GATAAGAATG TCGATCTATT TATTACCAGT GAACCCCCGA AGATTGATGG TTTAGGCGTA
TTAAAGATCC GTGATTACCA ATTACAACTC GTTTCTCATG ATCCAGATTG TCAATTAAAA
AGCAGTCAAA CGCTTCCTTT AGTGTATCTC GATTGGGGTG CTAAGTTTGC GATTCAGCAC
AGTAAGATAC CCGAGCTACA ACGCACGCCA ATTTTGCATA CGCACTCTTC TCGAATGGCG
TTAGATTATT TGATAGCAAA CTCTGGGGTT GGTTATTTGC CTGCGCCAGT TGTGAACCAG
AGCATTGAGG ATGGCGATCT TTACGTCGTT GATAACGCCC CCATCATGGA GCAGCATCTG
TACTTAGTAT GGAAAGAGAA AAGCGAGAAA TCAGAATTGA TCGAACGAAT TTTAAATATA
AAGCCGAATA ATGTCGCGGA AAGTGTTCAA TAA
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| Protein sequence | MNSLDTDLLK TFLEVTKTRH FGRAAEHLFL TQSAVSFRVR QLESQLGNPL FTRQRHNVQL
TAAGERLLPY AEAILQTWGR AKQDVALTED YNSQIAIGAS PLFWEFDGIS DWINGIYASI
PGLALRLESI RRQDLSKSLL DKNVDLFITS EPPKIDGLGV LKIRDYQLQL VSHDPDCQLK
SSQTLPLVYL DWGAKFAIQH SKIPELQRTP ILHTHSSRMA LDYLIANSGV GYLPAPVVNQ
SIEDGDLYVV DNAPIMEQHL YLVWKEKSEK SELIERILNI KPNNVAESVQ
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