| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0159 |
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| Symbol | cyoE |
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| ID | 6961635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 186185 |
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| End bp | 187057 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381478 |
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| Product | protoheme IX farnesyltransferase (cytochrome o ubiquinol oxidase C subunit IV) |
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| Protein accession | YP_002264520 |
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| Protein GI | 209808982 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAG AATACGTATC ACTGACCAAG CCCGGCATTA TCATGGGTAA CTTAATTTCG
GTATTAGCCG GTTATTTTCT AGCGGCTAAA TCTGAATCAA TTACTTTGTC ATTGCTTGTT
TATACTATGT TAGGCGTTGC TTTAGTTATT GCGTCAGGTT GTGTGGTGAA TAATATTTTT
GATCGAGATA TCGATGCTAA AATGTCGCGC ACTCGTAATC GAGCTATAGT GACAGGTTCA
ATCAATATAG AGTTCGCTTT TTTATTTGCG ATTATAATGC TACTGATTGG AACGGGCTTA
TTGTATAAAA TGGCCAATCC TTTGTCGGCG GTCATGGTAT TGTTAGGTTA TGTATTCTAC
GTATTCTTTT ACACGATGTG GTACAAACGT ACCTCGGTAT ACGGCACACT TGTTGGCAGT
GTATCGGGGG CGATCCCACC GTTAGTTGGT TACTTAGCGG TGACTAACTA CCTCAGTTTA
GAAGCCGTGT TGCTGTTTGG TTTATTCTGT TTATGGCAAA TGCCGCATTC TTATGCCATT
GCGATGTTTA GAATGAAAGA TTACCAACAA GCCAATATTC CGGTACTGCC ATTGGTAAAA
GGCATTCAAA AAGCACGTCA ACATATTATG ATTTATGTGC TGGTTTTTTC TGTTGTTGCA
CTTGGCTTAT ATGCTTTTGG ACATACTGGG TATGAGTATT TAGCCGTTGT TGCGATCTCT
TGTTATGGTT GGTTTAAAGT GACGTACAGA AATATGGATG AGTCTAACTA TGTTCAATGG
TCTAAATCGG TATTTAAGAC CTCATTATTG GCGATTACCG CTTTTAGTAC TGTGTTGGGT
ATTGAGTTAC TTCCTTTCAG TATTACATTT TAA
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| Protein sequence | MFKEYVSLTK PGIIMGNLIS VLAGYFLAAK SESITLSLLV YTMLGVALVI ASGCVVNNIF
DRDIDAKMSR TRNRAIVTGS INIEFAFLFA IIMLLIGTGL LYKMANPLSA VMVLLGYVFY
VFFYTMWYKR TSVYGTLVGS VSGAIPPLVG YLAVTNYLSL EAVLLFGLFC LWQMPHSYAI
AMFRMKDYQQ ANIPVLPLVK GIQKARQHIM IYVLVFSVVA LGLYAFGHTG YEYLAVVAIS
CYGWFKVTYR NMDESNYVQW SKSVFKTSLL AITAFSTVLG IELLPFSITF
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