Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0124 |
Symbol | |
ID | 6961602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 147755 |
End bp | 148519 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643381446 |
Product | ABC transporter, ATP binding protein |
Protein accession | YP_002264488 |
Protein GI | 209808950 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGAC CAGCAATTTC GTTAACCAAT GTTGGGCTGA CTTATGGTGA AAATACCATT TTAGAAGGGG TGAACCAACG CTTTGAAGCC GGTCAATGCC ATGTGGTGAT GGGGCCTAAT GGCGGAGGTA AAACCTCGTT ATTGCGTTCA ATTTTAGGAT TAACCGCGTT TCAAGGTGAA ATTAATATTG AATGGCCAGA GCAGAAAGGG GTGATTGGTT ATGTGCCACA AAAAGCCGTT TTTGAATCTA GCTTGCCACT AACGGTGAAA GATTTCATTT TATTGAATCA AACGCGAGTG CCTCTGTTTT TAAGTGCGTT ATGGCGTAAG AAAAGCAGCC AAGAAGCATT TGCAATGGCG CAGCTAGAGC GTGTTGGTAT GTCTAACCGT GCCGATCGTC GCATGGGGCA ACTTTCTGGT GGTGAGCAAC AACGTGTGTT ATTCGCGCAA GCGTTACTGG ATAATCCCGA TTTACTTGTT CTTGATGAAC CAACAACAGG AATGGATGAG CACGGGGTTC GTTATCTTGA ATCCTTAATG CATGAATTTA TCGCGCAAGG TAAAACGGTA TTAGCCGTTC ACCACGATGT GACCGCTGTT CGCCGTCTTA AAGCACATGT TCATGTTATC AATCGTAATT TGGTTGATTC TGGTTGTTAT TCAGAAGTAT TAAAACCTGA GAAAATTGAA CGTTTATTCA ATCATTATAC GGGTGCAAGT GCTCAGTACG ATGCATCAAA AACCAACAAT GGAGAGGCTG CGTAA
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Protein sequence | MSGPAISLTN VGLTYGENTI LEGVNQRFEA GQCHVVMGPN GGGKTSLLRS ILGLTAFQGE INIEWPEQKG VIGYVPQKAV FESSLPLTVK DFILLNQTRV PLFLSALWRK KSSQEAFAMA QLERVGMSNR ADRRMGQLSG GEQQRVLFAQ ALLDNPDLLV LDEPTTGMDE HGVRYLESLM HEFIAQGKTV LAVHHDVTAV RRLKAHVHVI NRNLVDSGCY SEVLKPEKIE RLFNHYTGAS AQYDASKTNN GEAA
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