Gene VSAL_II0115 details

Gene Information

• Locus tag: VSAL_II0115
• Symbol: tonB2
• ID: 6962459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 140373
• End bp: 140993
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643381437
• Product: TonB protein
• Protein accession: YP_002264479
• Protein GI: 209808941
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0810] Periplasmic protein TonB, links inner and outer membranes
• TIGRFAM ID: [TIGR01352] TonB family C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGCGAT TATTGTTGGC AGTGCCTATT GCGCTTTCTA TGACGGTAGG GCTATTCACG 
TTTATGGCAT GGATGGTAGA CAACGGTCAT AACGGCAAAC CAGAAAGTGG TGAGACGATT 
CGCTTTGACA TGGTGATGGT AGAGCAAGAA CAAGATGTTC AGCGCCGTCA ACGTCGAGTG 
CCTGAAAAAC CAGAAACACC AGAGCCGCCA CCAGAGGCAA AACCAATGGC GTCTCAAACA 
CAAACGTCGA TGGCAACGCC GCAAAGTAAT ATGCCGCTAA TCGGTCTTGA TTCAAGTATT 
TCAGGCTTAG CGATAAATGC ACCGAGTTTC ACCGATTTTA CAGGTAACCA ACAAGCGATG 
CCGTTGTATC GTGTTGAGCC TCGTTATCCT TCAAAAGCGA TGAAAAGAGG TGCTGAGGGG 
TTTGTTGTTA TGTCATTTAC CATTGATGAG CAAGGTCGCC CAACCAATGT AAAAGTGACG 
GATGCAAAAC CACGCCGAAT GTTTGAAAGA GAAGCGTTAA AAGCGCTGGA AAAATGGAAA 
TATCAGCCAA AAGTGGTCGA TGGGAAAGCC ATTGCTCAAG TTGGACAAAC GGTGAAATTG 
GAGTTTACGT TAGCAAAATG A 

 

Protein sequence

MWRLLLAVPI ALSMTVGLFT FMAWMVDNGH NGKPESGETI RFDMVMVEQE QDVQRRQRRV 
PEKPETPEPP PEAKPMASQT QTSMATPQSN MPLIGLDSSI SGLAINAPSF TDFTGNQQAM 
PLYRVEPRYP SKAMKRGAEG FVVMSFTIDE QGRPTNVKVT DAKPRRMFER EALKALEKWK 
YQPKVVDGKA IAQVGQTVKL EFTLAK