| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0062 |
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| Symbol | |
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| ID | 6961549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 88569 |
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| End bp | 90053 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381391 |
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| Product | membrane protein |
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| Protein accession | YP_002264433 |
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| Protein GI | 209808895 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGGGGC TATCTAGGGT CTGGATAACG CTAATAGGGA TTGTTTTATC CTCATTCACT
ATATCAGTAA CAGCAGAGAC AGATTCCCCT AGTTTTTATG GGAAGCGCTC TGTTGCGCCT
AATGAAACTC TTTCAGAGCA AGCCGCACCT ACTTTTCAGC GGCGTTCTAT TGTTATGACC
CCGCAGATAG TTGAACCTGA ACACCTTGAT GAGCGTGCAG TGACTGACGA ATCAACTGAT
TTAACGCCTG CATTTATTCA AGAAGACGAA GGCCCACATA ATTTCCCTAT TCCTTTGGTT
TTGGTTGAAT TGACCCGTAA TGAAAAATTA CTAGCAAAAA AAGCGCAATA TTATTTTGAT
CGTAATTGGA ATGAAAATAC GGGATTTACC GATTCTGTTC AAGGCTATCA CCACGTTACG
ATGTGGGATG TTGCCAGTGA TATCAGTGCT CAGTTCTCAC TTGAGGGCTT GGGTTTACAA
TCAAAAGAGT TCACTCATCG TAAATTAAAA AGGTTATTGA CGACGTTGCT AGAAGCGCCT
TTGTATCAAG GTAAATTACC TAATCGAGAA TACAGCACCA AAACTGGAAA GCCATCAGGA
CGGTACAGCA ATACAAAAAG CAATGGCAAT GGATGGTCGG CTTTAGACAT TGGCCGCCTG
CTGATTTGGT TGCATATCAT TAAACAAGAA AAAAAAGAAT TAGCCCTGTT GGTAGATAAT
ATCGTAAGTA AGTGGTCACT CGCTTCTTCA GTGCACAATA AAACCTTGTA TGGCACTAAA
TTAAGAAAGC AAAGTGAACA TTATCGCCAA GAAGGGCGTT TAGGGTATTT ACAATATGCA
GCTTCTGGTT TTGCTTTGTT TGGTTTTGAT GTGAGTGAAA GTTACCAGAA AACAGACATC
GATAAAGTGA TTATTGGTGG CATTCCTTTT TATATTGATT CGAGAAACAT GCCATTTTCA
ACGCCAGATC CCTATGTGCT CACTCGTTTA GAGTTGGGGG AACCGACAGC GTGGTGGGAT
CAGCTTGATA CTATTTATAC CCTGCATAAA GCAAAGGAAA AACAAACTGA AAGACTGTGG
GTGTTTGGGG AAGATGCCAT GAACCAAACA CCATGGTTTG CTTACAATAA TATCTTTTTT
TACGGTAAAA GTTGGCTAAG TACTTCAGCG GGAGGAAAGC CAATAGAAGT CTTTCAGGTG
TTCAGCAATA AAGTCGCCTT TGGGCTCAGT GTTATTTACG ATGACGAATA CGCTGAACGC
TTAGTTGAAA ATGTGATAGC CAATAGCCTG TACTCTCGCT CTGTTCCTAC GGGAATATAC
AGCGATGGCT TGACCAATAC GGCGCACAAC ATTAATACCA ATTCAATGAT TTTGTCTGCT
TTGTTGTACA AGAGGAAGAA TAATTCGGCG ATGTTACATA CCAACACTAA ACTTAATAAT
AAGGCGGTAA CGGTACTTGC TGATATTAAG GAAAGTGATG AATAA
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| Protein sequence | MMGLSRVWIT LIGIVLSSFT ISVTAETDSP SFYGKRSVAP NETLSEQAAP TFQRRSIVMT
PQIVEPEHLD ERAVTDESTD LTPAFIQEDE GPHNFPIPLV LVELTRNEKL LAKKAQYYFD
RNWNENTGFT DSVQGYHHVT MWDVASDISA QFSLEGLGLQ SKEFTHRKLK RLLTTLLEAP
LYQGKLPNRE YSTKTGKPSG RYSNTKSNGN GWSALDIGRL LIWLHIIKQE KKELALLVDN
IVSKWSLASS VHNKTLYGTK LRKQSEHYRQ EGRLGYLQYA ASGFALFGFD VSESYQKTDI
DKVIIGGIPF YIDSRNMPFS TPDPYVLTRL ELGEPTAWWD QLDTIYTLHK AKEKQTERLW
VFGEDAMNQT PWFAYNNIFF YGKSWLSTSA GGKPIEVFQV FSNKVAFGLS VIYDDEYAER
LVENVIANSL YSRSVPTGIY SDGLTNTAHN INTNSMILSA LLYKRKNNSA MLHTNTKLNN
KAVTVLADIK ESDE
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