| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2930 |
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| Symbol | |
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| ID | 6987974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3175273 |
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| End bp | 3176493 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643381209 |
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| Product | putative signaling protein |
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| Protein accession | YP_002264259 |
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| Protein GI | 209696328 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGCAT ACGTTGCTCG ACAACCGATA CTTAATCGAA AAAAACAAAC GATAGGGTAT
GAACTCCTTT TTCGTGATGG TGAAAGCAAC GCTTTTCCTG ATGATATAGA AGCGAATCAA
GCGACTTGCC GATTGTTGGT CGAGAACTTT ATGTCGGTCG GCTGTAATCC TGCTTTAGAA
TCTCCTCGTA GTTTTATCAA TTTCCCGCAA GAATCATTGA TTTCTCTTAT ACCTACGTCA
TTTCCGAAAC GGAAAATTGT AGTAGAAGTA TTAGAGACGT GCATTCCTAA TGATGAATTA
TTCAGTGCGA TTAAACATTT ACACCGCATG GGCTATATCA TTGCATTAGA TGATTTTAGT
TTAGATGCGG TGTGGGATCG TTTTTTACCT TATGCACATA TCGTGAAATT AGACATCATG
CAATTGGGTA TCAATGTTGC TTGTGACTAT GTGAAGAAAA AGAAACGAGA AGGCTGTAAA
CGTCATTATT TAGCGGAGCG TGTTGAAACA AATGAAGAGT TTCAGCAAGC ATTTGATGCC
GGTTTTTATT TCTATCAAGG GTATTTCTTT AGTAAACCTG AAATCATAAA AAATCGAGTG
GTTAAACCTG AAGAAGTATT AACGATGCAA TTGTTTCAAG AAGTGTGTCG TGATGACGTT
AATTTCAATC GTATTGAGCA GCTTATTGCT CAAGATGTGT CGTTGTCTTA TCAGTTATTA
AAATTCGTCA ATACGTCAGC CGTTCGTTTA GAAAAACCGA TTTCGTCTTT TAAACAAGCG
TTAGTGTATT TGGGTGAAGA ACAAATCAAA ATGTTTGTCA CTTTAGTCGC GACAGCTCAC
GCGGCAATCA ATAAGCCCAA AGAATTGTAT AAACAATCGC TGATTAAAGG GCGTTTTTGT
GAATTAATGA TTTGTAAGTG CCAGAATGGG ACGCAGGGAC AACAGGCGTT TATTGTGGGA
TTGTTTTCGT TATTAGACGC GTTGTTGGAT CGTAATTTTG ATGAATTACT GGTTCAATTG
TCTTTATCTG AAGATATTGA GCAAGCCTTA TTAACACAAT CAGGTCTGCT TGGTTCTATG
TTAAAGCTGT ATGAAAATGT AGATAAAGGA GATTGGACTC ATATTGATCA AGTCAGTCGC
TCTTTGGGTT TCTCTGCAAA AACGGTTGAA AAAACTTACG AAGAAGCTGA AAAATGGTAT
CAAGACATCC TTTCTAAATG A
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| Protein sequence | MYAYVARQPI LNRKKQTIGY ELLFRDGESN AFPDDIEANQ ATCRLLVENF MSVGCNPALE
SPRSFINFPQ ESLISLIPTS FPKRKIVVEV LETCIPNDEL FSAIKHLHRM GYIIALDDFS
LDAVWDRFLP YAHIVKLDIM QLGINVACDY VKKKKREGCK RHYLAERVET NEEFQQAFDA
GFYFYQGYFF SKPEIIKNRV VKPEEVLTMQ LFQEVCRDDV NFNRIEQLIA QDVSLSYQLL
KFVNTSAVRL EKPISSFKQA LVYLGEEQIK MFVTLVATAH AAINKPKELY KQSLIKGRFC
ELMICKCQNG TQGQQAFIVG LFSLLDALLD RNFDELLVQL SLSEDIEQAL LTQSGLLGSM
LKLYENVDKG DWTHIDQVSR SLGFSAKTVE KTYEEAEKWY QDILSK
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