Gene VSAL_I2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2889 
Symbol 
ID6987962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp3134265 
End bp3134963 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content41% 
IMG OID643381169 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_002264219 
Protein GI209696288 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0433096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATA TGGTAAATAA TATGTATCCT GAATTTGAAG CTGATGATCT TAATGCAGTG 
TTAGAAGTAA AGCAGCCAGT AAGCACTAAA GGTGTAAGGG CTCAGCAAAA AGAAAGAACA 
CGCAGAACCA TTATAGATGC CGCGTTTTGC CTACTATGTG CCGAACGAGG TTTCATGAGC 
TTGAGTTTAC GAGAAGTAAC AAGAGAAGCT GGTATCGCGC CTACGTCGTT TTATCGTCAT 
TTTAAAGATA TGGATGAGCT AGGGCTGACT TTAGTTGATG AAGGTGGACT TATTTTACGT 
CAGTTAATGC GTCAAGCTCG TCAGCGTATT GTGGTAGAAG GGAGTGTTAT CCGAACATCG 
GTTGAAACCT TCATGGAATT TATTGAAGGT AGTCCAAACG TATTTCGATT GTTATTACGT 
GAACGTTCAG GAACTTCATC TGCTTTTAGA GCAGCAGTGG CTCGTGAGAT CCAACATTTT 
GTTGCGGAAC TTACTGAATA TTTGATTGCC ACGACAGGTG TTGCTAGAGA AGAAGCGTCA 
GTTCAAGCTG AGGCGTCAGT TACCTTAGTA TTCAGTTCTG GTGCGGAGGC GCTCGACCTA 
GATACGCCTC ATAGAGATGA ATTGTCAAAA CGGTTAATTT TCCAATTACG TATGCTATCA 
AAAGGTGCTT ATTGGTATCG AAAAGAAAAT AAGATTTAG
 
Protein sequence
MQYMVNNMYP EFEADDLNAV LEVKQPVSTK GVRAQQKERT RRTIIDAAFC LLCAERGFMS 
LSLREVTREA GIAPTSFYRH FKDMDELGLT LVDEGGLILR QLMRQARQRI VVEGSVIRTS 
VETFMEFIEG SPNVFRLLLR ERSGTSSAFR AAVAREIQHF VAELTEYLIA TTGVAREEAS 
VQAEASVTLV FSSGAEALDL DTPHRDELSK RLIFQLRMLS KGAYWYRKEN KI