Gene VSAL_I2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2883 
Symbol 
ID6988197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp3128367 
End bp3128852 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content36% 
IMG OID643381162 
Productputative RNA binding protein 
Protein accessionYP_002264213 
Protein GI209696282 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000182039 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA CTAACTCAAA TATAATTATC ATTGCTATTG CTGTACTTGG TGCAGGTGCA 
ATCTCTGTAT TTCCATCGGT ATCTCCTGCA TTTGCTTTTG CTTTCGGCGC AGTAATTACA
GGTTTTACTC TTTTATTCAT TAATAAAGCA CCGTCTAAAT CTAAAACAGT AACAGACACT
ATTTCTAGTG CTGATACTTC AGATCAAGCG AGTACTACCC TTTATGTAGG TAACCTTCCT
TATCGAGCGA ATGAATCAGA TGTAAAAGAT TTATTTTCTG AATTTGGTGA TGTGTTTGCT
GTTCGTCTGA TGAAAGACAA ACGTACAGGT AAACGTAGAG GATTTGGTTT TGTTGTTGTG
GCAACAAAGG ACGCTGATAA TGTTATTGAA AACTTAAACA ATAACGAATT TGATCAACGT
ACTTTAAAAG TTCGCATTGC TAACGATCCA AAGACTTCGG GTAGCCTAGA GTCTGAAGAG
GATTAA
 
Protein sequence
MKSTNSNIII IAIAVLGAGA ISVFPSVSPA FAFAFGAVIT GFTLLFINKA PSKSKTVTDT 
ISSADTSDQA STTLYVGNLP YRANESDVKD LFSEFGDVFA VRLMKDKRTG KRRGFGFVVV
ATKDADNVIE NLNNNEFDQR TLKVRIANDP KTSGSLESEE D