Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2883 |
Symbol | |
ID | 6988197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 3128367 |
End bp | 3128852 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643381162 |
Product | putative RNA binding protein |
Protein accession | YP_002264213 |
Protein GI | 209696282 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000182039 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTA CTAACTCAAA TATAATTATC ATTGCTATTG CTGTACTTGG TGCAGGTGCA ATCTCTGTAT TTCCATCGGT ATCTCCTGCA TTTGCTTTTG CTTTCGGCGC AGTAATTACA GGTTTTACTC TTTTATTCAT TAATAAAGCA CCGTCTAAAT CTAAAACAGT AACAGACACT ATTTCTAGTG CTGATACTTC AGATCAAGCG AGTACTACCC TTTATGTAGG TAACCTTCCT TATCGAGCGA ATGAATCAGA TGTAAAAGAT TTATTTTCTG AATTTGGTGA TGTGTTTGCT GTTCGTCTGA TGAAAGACAA ACGTACAGGT AAACGTAGAG GATTTGGTTT TGTTGTTGTG GCAACAAAGG ACGCTGATAA TGTTATTGAA AACTTAAACA ATAACGAATT TGATCAACGT ACTTTAAAAG TTCGCATTGC TAACGATCCA AAGACTTCGG GTAGCCTAGA GTCTGAAGAG GATTAA
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Protein sequence | MKSTNSNIII IAIAVLGAGA ISVFPSVSPA FAFAFGAVIT GFTLLFINKA PSKSKTVTDT ISSADTSDQA STTLYVGNLP YRANESDVKD LFSEFGDVFA VRLMKDKRTG KRRGFGFVVV ATKDADNVIE NLNNNEFDQR TLKVRIANDP KTSGSLESEE D
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