Gene VSAL_I2702 details

Gene Information

• Locus tag: VSAL_I2702
• ID: 6989047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2926447
• End bp: 2927106
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643380972
• Product: putative transcriptional regulator, GntR family
• Protein accession: YP_002264039
• Protein GI: 209696109
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCTAGCC CTACCCTTAC TGATAAAGTA TCAAAAATGA TCCACCAAGA TATTCTTAGT 
GGCGATCTTC ACCCCGGTAA AAAGCTGGTT GTTGCTGAAT TAAAAAAACG CTACAACGTA 
GGCGCATCTC CAATTCGTGA AGCTCTTGTT CAATTATCAT GGAGCAAATA CGTTAAGCTA 
GAACCTCAAA AGGGATGTTG GGTTGCAACG ATCTCAATTA TTGAACTTGA AGAGCTATTC 
GAAGGTTTAC GAGTTGTAGC AAAAATGCTG TTAGAAAAAG CCATTTCTAA AGGTGATGAA 
GCGTGGGAAC TCAGTGTATT AACAAGCTAC CACAGATTAA GTAAAGTCAA CTTAGAGAAT 
ACACCAGAAG CAATCCAAGA ATGGACACAG CGTCACTCTG ACTTTCATAA CTCACTGCTT 
TCTGGCGCAG ACGCTCCTAT TATGTTCCAG TTTTATCAAG AATTAACAAA CCAAATTAGG 
CGTTATCGCC ATCTTCAAAA TACACATAAA ATGTTTAATA AAGAACATAC TGATTATTTG 
GAAGAACATG AAACAATCAT GAAATTAACG CTTTCTCGAA ATACAGATCA AGCGGTTGCA 
TTATTAGAAA GTCATTATAT TAAGACCATG GATCTACTCT CTGCCTATTT TGAAGCTTAA 

 

Protein sequence

MSSPTLTDKV SKMIHQDILS GDLHPGKKLV VAELKKRYNV GASPIREALV QLSWSKYVKL 
EPQKGCWVAT ISIIELEELF EGLRVVAKML LEKAISKGDE AWELSVLTSY HRLSKVNLEN 
TPEAIQEWTQ RHSDFHNSLL SGADAPIMFQ FYQELTNQIR RYRHLQNTHK MFNKEHTDYL 
EEHETIMKLT LSRNTDQAVA LLESHYIKTM DLLSAYFEA